Danio rerio (zebrafish): 403060
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Entry
403060 CDS
T01004
Symbol
smc1al
Name
(RefSeq) structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
dre04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
403060 (smc1al)
04114 Oocyte meiosis
403060 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
403060 (smc1al)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
403060 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
403060 (smc1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
403060
NCBI-ProteinID:
NP_997975
ZFIN:
ZDB-GENE-040426-57
Ensembl:
ENSDARG00000058203
UniProt:
Q6DRM9
LinkDB
All DBs
Position
23:14376646..14434123
Genome browser
AA seq
1233 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVTMVYQQDGGQELSFSRIIIGSSSEYRINNKVVGLSDYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRCKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHNESEIEKLNR
ELAHRNKEIDKDRKRMDRVEEELKDKKKELGRMMRDQQMIEKEIKEKDAELNQKRPLYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKGDMDELDREQGAVEMARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEILESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPQIKKALQYACGNALVCDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSRERDMKDLKDRMNVVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQ
TVKKDENEIEKLKKEEQRNMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLRSGTMDDISQEEGNSQAE
ESLSSSQKTSSTVLAKEALIEIDYNSLSEDLKDSLSDEEIKAEMNTLQQRLNEQQSILQR
ISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFHACFESVAT
NIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA
LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADS
LIGVYPEQGDCVISKVLTFDLSQYADANPNPNE
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttaaagttgatagaaatcgaaaactttaagtcttacaaaggtagacagata
atcgggcctttccacaagtttactgccattattgggccgaacggatcgggaaaatccaat
ctcatggatgctatcagctttgttctggcagagaagaccagcaatttacgtgtaaaaacg
ctaaaggatttgattcatggagctcctgtgggaaaacctgctgctaaccgagcatttgtg
accatggtgtaccagcaggatggaggacaggagctttcattttccagaatcatcataggt
tcctcttcagagtaccgcatcaataataaagtggtgggtctgtctgactacagtgaggaa
ctggagaaactaggaatcctcatcaaggccagaaacttccttgtctttcagggtgctgta
gagtcaattgcaatgaagaaccccaaagagagaacagctctgtttgaagagatttctcgc
tctggagagcttgcccaagaatatgacagatgcaaaaaagaaatggtcaaggctgaagag
gacacgcagtttaactaccatcgcaagaaaaacatagctgctgaacgaaaagaagccaaa
caggaaaaagaggaggcagagcgttatcaacgcctgaaggatgaggtggtgcgagctcat
gtacagttacagctgtttaaactgtaccacaatgaatcagagattgagaaacttaacaga
gagctggcccaccgcaataaagagattgataaagacagaaagcgcatggaccgtgtggag
gaagagttaaaagacaaaaagaaggagcttggcagaatgatgagagaccaacagatgatt
gagaaagagatcaaggagaaggatgcagaactcaatcagaagaggcctctgtacattaaa
gccaaggaaaacactgcccacaagatcaagaaattggaagctgcccgtaaatcacttcag
aatgcacagaaatgctacaaaaagcgcaagggagacatggatgagctggatcgtgagcag
ggggcagttgaaatggccagacaggagtttgaggagcggatggaggaggaggctcaaagt
cagggacaagatctacagctggaagagaaccaggttaaggcatatcaccgtttgaaggag
gaggcgagtaagcgagcagctaccctggctcaagagctagagaaattcaacagagaccag
aaagctgaccaggaccgtctggacctggaggagaggaagaaaatagaaacagaggccaag
atcaagcaaaaaatcagagagattgaggagaaccaaaaacgcattgagaagctagaggac
tatatcactactagcaggcagtctttggatgaacagaaaagaatggaagaggaactcaca
gaagaagtagaacaggccaaacgaagaatagatgagatcaacatggaacttaaccaggtg
atggagcagctgggtgatgctcgtatcgacaggcaggagaatagcagacaacagcgtaaa
gctgagatcttggagagcatcaagaggctgtatcctggatcagtgtacgggagactgatt
gacttgtgccagcctacacaaaagaaatatcagattgctgtcactaaagtgctgggcaaa
aatatggatgccattattgtggattctgaaaagacgggtcgtgactgtatccaatacata
aaagagcagcgtggtgaacctgagaccttcctccccctggactatctggaggtcaagccc
acagatgagaagctacgtgagctgcgtggtgctaaattggtgattgatgtaattcgatat
gagccaccacagattaagaaagccctgcaatatgcttgtggaaatgccctggtctgtgat
aatgtggaggatgctcgcaggattgcctttggaggaccatacagacacaagactgtggct
ctagatgggacgttattccagaagtctggagtgatctctggtggtgccagtgatctaaag
gccaaagctcgacgttgggatgaaaaagctgttgataagctgaaagacagaaaggaaaaa
ctcacagatgaacttaaagaacaaatgaaggccaaaagaaaggaagcagagctgcgtcag
gttcagtctcaagctcatggtttgcagatgaggctcaagtactcccagagtgatctggag
caaaccaagaccagacacctgtcccttaacatgcaggaaaaatcaaagctggaaagtgaa
cttgctaactttggtccacggattaatgatataaagagaatcatccagtcacgtgagaga
gatatgaaagacttgaaggaccgcatgaatgtggtggaggatgaggtgtttgttgagttc
tgtaaagagattggagttcgtaacattcgtgaatttgaagaagaaaaagtcaaaaggcag
aacgagattgcaaagaaacgcttagaatttgagactcaaaaaacacgtctggcaatacag
ctggattatgagaaaaaccagctgaaggaagaccaagagaaggtggtcatgtgggaacag
acggtcaagaaagatgaaaatgagattgaaaagcttaagaaggaagagcagaggaatatg
aagataattgatgagaccatggcacaattgcaggatctgaaaaaccagcacttgactaag
aaatctgaggttaatgataaaaaccatgaaatggaggagatccgcaagaaactagggggt
gccaacaaggagttgacgcagctgcagaaggaagtgactgctatcgagaccaagctggag
caaaaacgcagtgacagacacaatctactgcaggcttgtaagatgcaggacatcaaactt
cctctccgatcgggaactatggatgacatcagccaggaagagggcaattcacaggcagag
gagagcctcagcagcagtcaaaagacatcgagcactgtcttggccaaggaagctcttatt
gagattgactacaacagcttgtctgaggacttaaaagactccttgtcagatgaggagatc
aaggcagagatgaacacattacagcaaagactcaatgagcagcagagcatcctgcaaagg
atcagtgcacccaacatgaaggccatggagaaactagagagtgtcagagacaaattccag
gagaccagcgatgagtttgaagctgctaggaagagggcaaagaaagccaagcaggcattt
gaacagataaagaaggagagatttgaccgtttccacgcctgctttgagtctgtggccacc
aacattgatgagatttataaagctctgtcacgcaacagcagtgcccaggcatttctggga
cctgagaacccagaggagccatacctggatggtataaactataattgtgtggccccaggt
aaacgtttcaggcccatggacaacctgtctggaggagaaaagactgtggcagctctagcc
ctactgtttgctattcacagctataagcctgctcccttttttgttctggatgagattgat
gcagcactggataataccaacattggcaaggttgcaaactacatcaaggatcagtcggtg
cagaactttcaggctattgtaatttccttgaaagaggagttttacactaaggctgactcc
ctgattggagtttacccagagcaaggagactgtgtcatcagtaaagttctgacctttgat
ctctcccagtatgcagatgccaatcccaatccaaatgaatga
DBGET
integrated database retrieval system
