Danio rerio (zebrafish): 403311
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Entry
403311 CDS
T01004
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04218
Cellular senescence
dre04260
Cardiac muscle contraction
dre04261
Adrenergic signaling in cardiomyocytes
dre04270
Vascular smooth muscle contraction
dre04530
Tight junction
dre04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
403311 (cacna1db)
04020 Calcium signaling pathway
403311 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
403311 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
403311 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
403311 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
403311 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
403311 (cacna1db)
04270 Vascular smooth muscle contraction
403311 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
403311 (cacna1db)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
403311 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
403311
NCBI-ProteinID:
XP_021334185
ZFIN:
ZDB-GENE-040525-3
UniProt:
A0A8M9QJ57
LinkDB
All DBs
Position
8:53406021..53470174
Genome browser
AA seq
2087 aa
AA seq
DB search
MDEPEEPNEGANYASGSRVPVPSDECPAVSLSAAQSAALSWQAAISAARETQDSSKTVNL
SAAVSAAPAGSLSQRKRQQYAKSKKQGSSTNSRPPRALFCLTLNNPVRRACINLVEWKPF
DIFILLSIFANCVALAVYIPFPEDDSNSTNHDLETVEYAFLIIFTIETFLKIVAYGLVMH
QNSYVRNGWNMLDFVIVIVGLFSVVLELITKDRDVSGQSGGKPGGFDVKALRAFRVLRPL
RLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYLSATRI
LAEEDPAPCSLSGHGRHCPLNGTVCRDGWHGPNNGITNFDNFLFAMLTVFQCITMEGWTD
VLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREK
QQLEEDLKGYLDWITQAEDIDPDNEEEGDQEAKRNRVMLADLSRSKSTANSAWFSQSTET
QASVPTSENESVNTENPGEDEKIFCGPFCQKLTKSKFSRWRCWNRFCRRKCRAVVKSTVF
YWLVILLVFLNTLTISSEHYNQPDWLTEVQDVANKVLLALFTCEMLIKMYSLGLQAYFVS
LFNRFDCFVVCGGIVETILVELEIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLN
SMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGE
DWNTVMYDGIMAYGGPSSSGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNSAQ
KEEEKRNKRRKSRSMSIYKRDGDDRELKAPDDQEASRDPAEELADSSEEEEEEEPEVPSG
LRAQRLSELSLREKMPPIPDGSAFFILSNSNPIRVLCYRLINHQIFTNLILIFIMLSSVS
LAAEDPIRNFSARNIVLGYFDYAFTAIFTVEILVKMTAFGAFLHKGAFCRSYFNLLDLLV
VGVSLVSFGIQSSAISVVKILRILRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVT
TLLQFMFACIGVQLFKGKFYRCSDEAKSTPEDCKGTYIVYSMGETAFPQMRERLWFNSDF
NFDNVLMAMMALFTVSTFEGWPALLYKAIDSSKENIGPIYNYRVEISIFFIIYIIIIAFF
MMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNRYQYKFWYVV
NSTGFEYIMFVLIVLNTLCLAVQHHGQSRLFNYAMDVLNMVFTGVFAVEMILKLVAFKPK
GYCVDPWNGFDALVVIGSVVDIILSQHYFADAWNTFDALIVVGSIVDIAITEINNTEDSA
RISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQV
FGKIAMVDGTSINRNNNFQTFPQAVLLLFRCATGEAWQQIMLACLPGKLCDSESDYNPGE
EKSCGSNFAILYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSE
YDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLF
ALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEITVGKFYATFL
IQDYFRKFRKRKEQGLVGGQMLFNTTTALQAGLRTLHDIGPEICRAISCDLQDEGLVDAN
LHDEEEMVGRNGVVFGNHVSGDQFSSVTQRPLQLPLPQSQPLSDARSSNSNINNANGPGI
TNGWHSGRSLVSSLSVCLNLRADGETQTHRPFSSAVGYPTIQVENPTRDDVSDEDRTSGE
FYSGEEFHDEDVMLARDRSYRDVQDTLSDGDSVRDQDMYESVCDDEDEQLISPHPQRSSR
RLLRSTAPASHRSAFHFECLRKQSQDQIQLRPAASPPQHHQVRMMSGQESSQSRLSPTRS
IRSWVTPPTTPPPYTPLVQATPSASSTPGLVHRGFWNTQQASDWSMRSPPTTSSLLKVPP
RLCGHHLQTRSSAHSLVEAVMISGGLGKYAKDPKFVTVTKHEIADACEMTIDEMESAASN
LLNVTLGSGGNETGLSPNLRDYSDEETDSSSRRDEDLADEMIYVSVL
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccgaggaacccaatgaaggggcgaactatgccagcggcagcagagtgccc
gtccccagcgatgaatgtccggcggtcagtctctccgcggctcagtccgccgctctctcc
tggcaggccgccatttctgccgccagagaaactcaggactccagcaagaccgtgaacctg
tcggcggcggtcagcgctgcgccagccggatcgctgtcccagaggaaacgccagcaatat
gccaaaagcaagaagcagggaagcagcaccaacagcagacctccgagagcgctcttctgc
ctgacgctcaataaccctgtgcgcagagcctgcattaacctggtggagtggaaacctttt
gatatctttatactgctgtcaatctttgccaactgtgtggccttagctgtttacatcccc
tttcccgaagacgattccaactcaactaatcatgatttggaaacagtagaatatgccttc
ctgatcattttcacgattgaaaccttcctcaagatcgttgcgtatggactggtgatgcac
cagaactcctatgtgagaaacggctggaatatgctggattttgtgatcgtcattgtcggt
ctcttcagtgttgttctggagctgataaccaaagatcgtgatgtcagcggtcagtcgggg
gggaagccgggcgggttcgacgtcaaggctttgcgggcgttcagagtcctgcggcccctc
cgcctcgtctcaggagtgccaagcctacaggtggtgctgaactccatcattaaagcgatg
gttcctctcctccacatcgctctgctggtgctcttcgtcatcatcatctacgccatcatc
ggtctggagctcttcatcgggaagatgcacgccacctgttacctgagtgctacgcgtatt
ttagcagaagaggatcccgcaccctgttctctgtcgggtcatgggcgtcactgtccgctg
aatggcaccgtgtgcagagacggctggcacggaccaaacaacggcatcaccaactttgac
aacttcctgttcgccatgctgactgtgttccagtgcatcactatggagggctggacagat
gtgctgtactggatgaatgatgccatgggttttgagttgccttgggtttatttcgtcagc
ctggtgatcttcggctccttcttcgtcctcaatctagtgttgggagttctcagcggtgag
ttctccaaggagcgcgagaaggctaaagcccgcggagatttccagaagctgcgtgagaaa
cagcagctggaggaggatctgaaaggttatctggactggatcactcaagctgaggacatc
gacccggataatgaagaagagggagatcaggaggccaaacgcaaccgagtgatgctggct
gatctcagccgctccaagagcaccgcaaactcagcctggttcagtcagtccactgagact
caggcgagcgtcccgaccagcgaaaacgagtctgtgaacactgagaacccaggagaagat
gagaagatcttctgtgggcctttctgtcagaaattgacaaagtcgaagttcagccgctgg
cggtgctggaacaggttttgtcgcagaaagtgtcgagccgtggtaaagtccaccgtattt
tactggctggtgattctgctggtgtttctcaacacactcacgatatcatccgagcattat
aaccagcccgactggctcacggaggtccaggatgtggctaataaggtgttgctagcgctg
ttcacatgtgagatgctgattaagatgtacagtctgggactgcaggcgtacttcgtgtcg
ctcttcaaccgattcgactgcttcgtggtgtgcggaggaatcgtggagaccattctggtg
gagctggagatcatgtctccgctcggcatctccgtcttccgctgcgtcaggctcctgcgg
atcttcaaagtcacgcgtcactgggcatctctcagtaatctggtggcgtctctgctgaac
tccatgaagtcgattgcatctctgctgctgttgctcttcctcttcatcatcatcttcagt
ctgcttggcatgcagctcttcggcggaaagttcaacttcgatgagactgtgaccaaacgc
agcactttcgacaacttccctcaggccctgctcaccgtctttcagatcctgacgggtgag
gactggaacacagtgatgtatgatgggatcatggcatacggcggaccctcttcatcaggc
atgctggtgtgcatctacttcatcatcctcttcatctgtggaaactacatcctactgaac
gtcttcttggccattgctgtggataatctggcagatgcggagagtctgaactcagcccaa
aaagaggaggagaagaggaacaagaggaggaagagcaggagtatgagcatctacaaaaga
gatggagatgaccgagaacttaaggcacctgatgatcaggaggccagtcgggatccggca
gaggagctggcggactcctcagaggaggaagaggaagaggagcccgaggtgccatccgga
ctgcgggcacagagactgtcagagctgagcctcagagaaaagatgccccctattccagac
ggcagcgccttcttcatcctgagcaactccaacccgattcgcgtgttgtgttatcgactc
atcaaccatcagatcttcaccaacctcatcctcatcttcatcatgctgagctccgtctcg
ctggcggccgaagatcccatccgaaacttctctgcccgaaacatcgttctgggttatttt
gattatgccttcaccgctattttcacagtggagatcttggtgaagatgacggcgttcggc
gctttcctccataaaggcgctttctgcaggagctacttcaatctgctggatctgctggtg
gtgggagtctctctggtgtccttcggcattcagtcgtctgctatttcagtggtgaagatc
ttgaggattctgcgggttcttcgtccgctgagagccatcaacagagctaaaggactgaag
catgtggttcagtgtgtgtttgtggccatccggacgatcgggaacatcatgatcgtcacc
acactcctgcagttcatgttcgcctgcatcggcgtgcagctcttcaaggggaagttttac
cgctgcagtgatgaagcaaagtcaacgccggaggattgcaaagggacgtatatcgtgtac
agtatgggtgagacggcgtttcctcagatgcgtgagcgtctctggttcaacagcgacttt
aactttgataatgtgctgatggccatgatggcgctcttcaccgtctccacctttgaggga
tggccagcgctgctgtacaaggccatcgactccagcaaggagaacatcggccccatttac
aactaccgcgtggagatctccatcttcttcatcatctacatcatcatcattgccttcttc
atgatgaacatcttcgtgggtttcgtcatcgtcacctttcaggagcagggagagaaagag
tacaagaactgtgagctggacaagaaccagcgtcagtgtgttgaatacgctctgaaagcg
cgtccgctgaggagatacatccccaagaaccgctatcagtacaagttctggtatgtggtg
aactctacaggcttcgagtacatcatgtttgtgctgatcgtcctcaatactctgtgtctg
gccgttcagcatcacggccagtctcgactatttaactatgcgatggatgttttgaacatg
gttttcacgggcgtctttgctgtggaaatgattctcaagctggttgccttcaagccgaag
ggttattgtgtggatccctggaatggttttgatgctctggtggtcattggcagcgtagta
gacatcattctaagtcagcattattttgctgatgcatggaacacatttgatgccttaatt
gttgtcggtagcatcgttgacattgcaatcacagaaatcaataacacggaggacagtgcg
agaatctccatcacgttcttccggctgtttcgggtcatgcgtctagtgaagctgctgagc
cgaggagaaggcatccgcacgctactctggacattcatcaagtcttttcaggctctgccg
tatgtggctctgctcatcgccatgctcttcttcatctatgctgtcatcggaatgcaggtg
ttcgggaagattgctatggtggatggaaccagtattaatcgcaataataatttccagacc
tttcctcaagccgtgctcctgctgttcaggtgtgcgacaggtgaagcgtggcagcagatc
atgttggcttgtttacctggaaaactgtgtgattccgagtccgactataatcctggagaa
gagaaatcctgcgggagcaacttcgccatcctctacttcatcagcttctacatgctctgc
gctttcctgatcattaatttattcgtcgccgtcatcatggacaactttgactacctgaca
cgtgattggtcaatccttggaccgcatcatttagatgaattcaagaggatctggtcggaa
tatgatcccgaggccaagggccgaatcaagcatttagacgtggtgacgttactgcgcagg
attcagccgccgctgggcttcggcaaactgtgtcctcatagagtcgcgtgcaagcggctg
gtcgccatgaatatgcccctgaacagtgacggtacggtgatgttcaacgccacgctgttc
gctctggtcagaacagctctgaagatcaagactgaagggaatctggaacaagccaacgag
gagctgcgagccgttatcaagaagatctggaagaaaaccagcatgaagctcctggaccaa
gtggtgccacctgctggagatgatgagatcactgttgggaagttctacgcaactttcctg
atccaagactacttcaggaaattcaggaagcgcaaagagcaagggcttgtgggaggacag
atgctcttcaacaccaccaccgctctacaggctggtctgcgtacgctgcatgatatcggt
cctgagatctgtcgggcgatctcctgtgatcttcaggatgaaggtctggtcgacgctaac
cttcatgatgaggaggagatggtcgggaggaacggtgttgtgtttgggaatcatgtgagt
ggtgatcagttcagcagtgttacccagcgtcctctgcagctgccgctcccacagagtcag
ccactgtccgatgccagatcctccaactccaatataaacaatgccaatggtcccggcatc
accaacggctggcacagcggcaggagcctggtgtcatccctgagcgtctgcctgaacctc
agagcagatggagaaacacagacacacaggccgttctccagtgctgttggatatcccacc
attcaagtggagaacccgactcgtgatgatgtcagtgacgaggacaggacttctggagag
ttttacagtggtgaagagtttcacgatgaggacgtgatgctggccagagacaggtcatac
agagacgttcaagacacactcagtgatggagattcagtccgagaccaggacatgtatgag
agtgtgtgtgatgatgaagacgagcagctgatttccccgcatccccagcgctcctcaaga
cgactcctgcgctccacggctccagcctcccacaggtctgcttttcatttcgagtgtctg
cgcaaacagagtcaggatcagattcagcttcgtcccgcagcttcaccaccacagcatcat
caggtgaggatgatgagtggccaggaatccagccaatcacgactctctccgacgcgctcc
atccgctcgtgggtcacgcccccaaccacacctcctccatacactccactggtccaggcc
acgcccagcgccagcagcactccgggattggtccacagaggcttctggaacacacagcag
gcttctgattggtcgatgcggtctccgcccaccacctcctccctcttgaaggtccctcca
cggctatgtggacatcatctgcagacgcggagcagcgcacacagcctggtggaggccgtg
atgatatctggtggactgggaaaatacgcgaaggatccaaagtttgtgactgtaaccaaa
cacgagattgcagacgcttgcgaaatgacaatcgacgagatggaaagtgccgctagcaac
ctactgaatgtgacgctgggctctgggggaaacgagacaggtttgagtccaaatctacga
gattacagcgatgaggagacggacagtagcagccgacgggacgaggatctggccgacgaa
atgatctacgtctcagtgttgtag
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integrated database retrieval system
