Danio rerio (zebrafish): 404041
Help
Entry
404041 CDS
T01004
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
404041 (papola)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
404041 (papola)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
404041 (papola)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
404041 (papola)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
404041
NCBI-ProteinID:
NP_991321
ZFIN:
ZDB-GENE-030131-3507
Ensembl:
ENSDARG00000009585
UniProt:
Q5SNY2
LinkDB
All DBs
Position
20:complement(4855252..4881449)
Genome browser
AA seq
723 aa
AA seq
DB search
MPFPITSQVQTAQPTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEELELQRR
ILVLGKLNTLVKFWIREVSEAKNIPASVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERTDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPEN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKEGNDKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDM
KITAMHVKRKQLHQLLPEVAIHRSKRKHSSDGVRAMNDSNLDLSLDSDNSMSVPSPTGPS
AAKIARAPSPQGSTGTATNTSELQGKTEATGENTHLASVDGTSSSNASGKGAAPPQSTSP
IQSEKKPSEQNPLPSPCLSAEPAVKRPASALENEMTKKAKVEDLSAPEAKSSGETDGHVA
PAIVEVIPSDGELKTETELMVEDTAEKVPLAQKTSNADLSDVPVLPSNPIPVVKNSIKLR
LSR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccttttccaattaccagccaggtgcaaactgcccagccgaccccaaaacattatggg
atcacatctcctatcagcttggcaccgcctaaagaggctgatctggttctcacgcggaag
ctgacagagactctccgacctttcggcgtctttgaggaggagctggagctgcagcgcaga
atcctggtgctcgggaagttaaatacattggttaagttttggatccgggaagtcagtgaa
gcgaagaatattccagcttcagtgattgacagtgttggtggaaagatcttcacgtttgga
tcctacaggcttggagttcataccaagggtgctgatattgatgctctctgtgtcgcaccc
cgccatgtggaaagaaccgacttcttctcatcattttatgagaagttaaaagaacaggag
gaagtcaaagatctgagggcagtggaagaagcttttgtgcctgtgataaagctggctttt
gatggaattgagattgacatactgtttgccagactggcactacaaaccattccagagaac
ttggatttgcgagatgatggcttactgaagaaccttgacattcgctgtatccggagttta
aacggttgcagagtcactgatgagattcttcacctggtgcccaacatagagaatttccga
ctgactcttagagccatcaaactgtgggccaaacgtcacaatatctactccaatatcctg
ggttttctcgggggtgtatcgtgggccatgctagtggcaagaacctgccagctgtacccc
aatgctgtggcagccacactggtccataagttctttttggttttctcaaagtgggaatgg
ccaaacccagtccttctgaaacagcctgaagactgtaaccttaacctccctgtctgggac
cccagggtaacccccagtgaccggtaccacctcatgccaatcatcacaccagcttaccct
caacaaaactccacttacaacgtttcagcctccactcgggccatcatggtggaagagttc
aagcggggtctcgcaatcacggatgaaattttgcagaataaagcagattggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagcgca
cagacagagaagcagcatttagagtgggttggccttgtggaatcaaagatccgaatcctc
gtgggaaacctggagaagaatgaattcattacactcgctcatgtgaatccacagtcattc
ccgggaccaaaagagggaaatgacaaagaggagtttagcacaatgtgggtaataggtatt
gtgttcaaaaaaatggagggatcagaaaatcttaatgtggacctgacgtttgacatccag
tccttcacagacacagtttatcgtcaagcgatcactagtaaaatgtttgagcaagatatg
aaaatcacagccatgcatgtcaagaggaaacagctgcatcaactactgcccgaagtcgcc
attcacaggagcaagagaaagcattcatctgatggtgttcgtgcaatgaatgacagcaat
ctggacctttcacttgacagcgacaacagcatgtcagttccctccccaacgggcccttca
gctgcaaagatagcccgagcccccagccctcagggatccactgggaccgccacaaacacc
tcagaactgcagggaaaaacagaggctactggcgaaaacacacacctggctagtgttgat
gggacctccagcagcaatgcctctggaaaagaagcggcccctcctcagtctacttcacct
attcagtctgaaaagaaaccctctgaacagaaccctctgcccagtccatgtttatctgct
gaacctgctgttaagagacctgcctctgccctcgagaatgagatgaccaagaaagccaaa
gtagaggacctgtcagccccagaagcaaagtcctcaggtgaaactgatggccatgtggct
ccagcgatcgttgaagtgattccttcagacggagaactgaaaacagagactgaattaatg
gtggaggacacagcagagaaggttccacttgctcagaaaacatccaacgctgatctatcg
gacgtcccggtcctcccaaacaaccccatccctgtggtcaagaattcgatcaagctccga
ctcagcaggtag
DBGET
integrated database retrieval system
