Danio rerio (zebrafish): 404617
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Entry
404617 CDS
T01004
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1
KO
K10348
LRR-repeat protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
404617 (lrr1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
404617 (lrr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
404617
NCBI-ProteinID:
NP_996968
ZFIN:
ZDB-GENE-040426-2337
Ensembl:
ENSDARG00000104448
UniProt:
Q6NYX1
LinkDB
All DBs
Position
17:132567..139597
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AA seq
436 aa
AA seq
DB search
MKLQCDVEVINRMLPSCGLKSKGRSSRAVLSIGRPERERAAPSTGSNGSTSTGSSGSGLH
LLICTSRDRSGAKYKLKENVEKFFTWFVEEGKATVRLKEPAIDICLSKADVTSLKSFLSA
VRLAQRGAAAAGGVPLSALCPVRAREVEKPKQKLTVLSRRDYPLTRSFPPALQQLQVSYC
QLSRVDLRVLSLRALRRLDLSNNRIRALPAGLGDLRALAELVLHNNQLERFGDELCCSGL
QTSLRLLDLSHNLLPALPARFCQLRQLVTLRLDHNRLQRLPFHLGRLSALRFLSAAHNQL
PVLPDGFRSLRLDTLDLFGNPFARAHTLQPRMLITLPLTLQELAARTVLDHRVPHSPQLL
PLHLCRELDFSSVCVCGRVCVNAFIQTAVSFNLHQVAHTVVLVDNMGGTEAPVHTHFCSL
LCYCQHMDECVQRELR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcagtgtgatgtggaggtcataaaccggatgttgccgtcctgcgggctgaag
agtaaaggtcgttccagccgtgcggtgctgtccatcgggagacccgagagggagagagcc
gctcccagcaccgggagtaatggcagcaccagcaccgggagcagcgggagcggactacac
ctcctcatctgcaccagcagagaccgcagcggcgccaaatacaagctgaaggagaatgtg
gagaagttcttcacctggtttgtggaggagggaaaagcgacggtgcgtctgaaggagccg
gccatcgacatctgcctgagcaaagcggacgtcaccagcctgaagagcttcctgtcagcg
gtgcgtctggctcagcggggcgcagcagcagcgggtggtgtccccctgtcggcgctgtgc
ccggtgcgcgcccgtgaggtggagaagcctaagcagaagctgacggtgctgtcccgcaga
gattacccgctgacccgcagcttcccgcccgcgctgcagcagctgcaggtgtcgtactgc
cagctgagccgtgtggacctgcgagtgctgagcctgcgggcgctgcggcgactcgacctc
agcaataaccgcatccgggcgctgccggcgggcctgggggatctgcgggcgctggcggag
ctggttctgcacaataaccagctggagcgcttcggggacgagctgtgctgctccggcctg
cagacctcgctgcgcctgctggacctcagccacaacctgctgcccgccctgccggcccgc
ttctgccagctgcggcagctggtgaccctgcggctggaccacaaccggctgcagcggctg
cccttccacctgggccggctctctgcgctacgcttcctctccgccgcacacaaccagctg
ccggtgctgcccgacgggttccggagtctccggctggacacactggacctgttcgggaac
ccgttcgcccgcgcacacaccctgcagccgcgcatgctcatcacactgccactgaccctg
caggagctggcggcccgtaccgtgctggaccacagggtcccgcacagccctcagctgctg
ccgctccacctgtgccgcgagctggacttcagcagtgtgtgtgtgtgcggacgcgtgtgt
gtgaacgccttcatccagaccgccgtcagcttcaacctgcaccaggtggcacacactgtg
gttctggtggacaacatgggcggaaccgaggcgccggtgcacacacacttctgctcactg
ctgtgttactgtcagcacatggacgagtgtgtgcagcgcgagctccgatga
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