Danio rerio (zebrafish): 405762
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Entry
405762 CDS
T01004
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
405762 (cdx1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
405762 (cdx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Caudal_act
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
405762
NCBI-ProteinID:
NP_998001
ZFIN:
ZDB-GENE-050510-1
Ensembl:
ENSDARG00000114554
UniProt:
Q8AXR4
LinkDB
All DBs
Position
14:3784473..3809819
Genome browser
AA seq
228 aa
AA seq
DB search
MSVSYLLDTAMYGNPARHLNLSQPHLNVYPSAPYPDYSGYHPGPALGNDLHHTGSSWSPG
FGPGSRDDWPPLYGHGTGHSLPANGVEVSVLPSVDQGLLSGAPVDREEPQDWMRRSAVPT
NPGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNR
RAKERKMNKKRLQQVQQSSSGLANTTTVSSSDSGLMTDNISSSIKEEY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgagctacctgctggacacggccatgtacggcaaccccgcgagacacctgaac
ctcagccagcctcacctgaacgtctacccgtccgccccgtacccggactacagcggatac
catccgggaccggcgctcggcaatgacctgcatcacaccggcagctcatggagtccgggg
ttcgggcccggttcgcgcgatgattggcccccgctgtacggccacgggacgggtcactct
ctgccggctaacggggtggaggtcagcgtgctgccatctgtggatcaggggctgctgagc
ggagcgccggtggacagagaggagccgcaggactggatgaggcgcagcgcggtgccgacc
aaccctggagggaaaacacggacgaaggacaagtacagagtggtgtacagtgacgtccag
cgcctggagctggagaaagagtttcatttcagccgctacatcaccatcagaaggaaggcg
gagcttgcaggaacactcaacctatcagaacgccaggtcaagatctggtttcagaacaga
cgagccaaagaaaggaagatgaacaaaaagcgtctccagcaggttcagcagagctccagc
ggtctggcaaacaccaccacggttagcagctccgacagcggcttgatgacagacaatatc
tccagctccatcaaagaggaatactga
DBGET
integrated database retrieval system
