Danio rerio (zebrafish): 405791
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Entry
405791 CDS
T01004
Symbol
cacna1sb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, b
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04260
Cardiac muscle contraction
dre04261
Adrenergic signaling in cardiomyocytes
dre04270
Vascular smooth muscle contraction
dre04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
405791 (cacna1sb)
04020 Calcium signaling pathway
405791 (cacna1sb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
405791 (cacna1sb)
09153 Circulatory system
04260 Cardiac muscle contraction
405791 (cacna1sb)
04261 Adrenergic signaling in cardiomyocytes
405791 (cacna1sb)
04270 Vascular smooth muscle contraction
405791 (cacna1sb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
405791 (cacna1sb)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
405791 (cacna1sb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
405791
NCBI-ProteinID:
NP_999891
ZFIN:
ZDB-GENE-051227-1
Ensembl:
ENSDARG00000042552
UniProt:
Q6RKB0
LinkDB
All DBs
Position
8:25767768..25808337
Genome browser
AA seq
1847 aa
AA seq
DB search
MESGGGGGGGGPGGGGVAGLASFIMNEEELKRKQREKLKKLLATGGNPRPPRTLFFFKLR
NPFRKACTNIVEWKPFEIIILLTIFANCVALAVFLPMPEEDTNNTNLTLESLEYIFLVIF
TLECFLKIIAYGLLFHEGAYLRNCWNILDFVIVFMGLFTLVVDTIDTITGVQKEKGGGFD
MKALRAFRVLRPLRLVSGVPSLQVVMSSVLKSMLPLFHILLLVFFMVTIYAIMGLELFKC
KMHKTCYYQGTNIIALRENEKPSPCAQAGNGRRCTINGTECRDGWPGPNFGITHFDNFGF
AMLTVFQCITTESWTDVLYWINDAMGNDWPWIYFLSLIMLGSFFILNLVLGVLSGEFTKE
REKSRSRGEWQVLRERQQMDEDLKGYMEWITHAEVMDGDSDAMLLLRKDTGSETDSLYKM
EGINKVVYFYRLARRWNIVIRRKCHGWVKSKSFNWWVLIVVLLNTLVIATEHHNQTEGLT
NFQDTANVILLACFTIEMIMKMYAFGPRSYFMSIFNRFDCFVVTIGILEIILVGSGIMTP
LGISVMRCIRLLRLFKLTKYWTSLNNLVVSLLNSVKSIASLLLLLFLFIVIFALLGMQVF
GGKFNFPDRPIQRSNFDNFPQALISVFQVLTGEEWDTIMYNGIMAHGGPKSPGILVSIYF
IILYVCGNFVLLNVFLAIAVDNLAEAESLAAAQKERAEERARKKLMKPLPEKTEEEKALM
AKRLMESRQKTEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRP
MADLQLKETVVPMPEASSFFIFGPQNKFRKLCHRIINHTTFTNIILLFILLSSISLAAED
PIDPHSFRNKVLAYADIVFTTVFTIEIVLKMTVYGAFLHPGSFCRNSFNILDLIVVAVSL
LSMGMESSTISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAIKTIGNIVLVTMLLDF
MFSCIGVQLFKGTLFYCTDPLQKTAEQCQGTFLKHVQNSLHDTEIHQRRWVNSDFNFDNV
LNGMLALFTISTFEGWPEILYKAIDSYDVDTGPLYNNRVGISIFFIIYIIIIAFFMMNIF
VGFVIVTFQRQGEQEYKNCELDKNQRQCVQYALKARPLKCYIPENPHQYRVWYLVTSCYF
EYLMFFLIMLNTLSLGMQYCNQPFYITKLSDNLNVIFTVLFTGEMIVKLIAFKAKGYFGD
PWNVFDFVIVIGSIVDVVLSEVDRTLEASGGLWCLHGCSEVDPMQAIAEAENVKLSITFF
RLFRVLRLIKLLNRSEGIRNLLWTFIKSFQALPHVGLLIVMLFFIYAVIGMQMFGKIALV
DGTEINRNNNFQTFPQAVLLLFRVATGEQWPKIMLASMYGKLCDPKSDYGPGEEYTCGSS
IAVCYFLSFYMLCAFLVINLFVAIIMDNFDYLTHDWSILGPHHLDEFKKIWGEYDPEATG
RIKHLDVVTLLRRIQPPLGFGKFCPHHAACKRLISMNMPLNSDGTVTFNATLFALVRTAL
KIKTEGNFEQANEELRAIIKSIWKRTSMKLLDQVIPPIGEDEVTVGKFYATFLIQEHFRK
FMQRQEELYGYRPTKKNADEIKAGLRSIEEEAAPELHRAISGDLIAEDEMERAMESGEEG
IYRRTGGLFGLNADPFSSEPSSPLSTQVTSQRPLQFAENRPEDAGSPPDSVFLPNTEFFP
DNMPTTSNTNNNANFIEEFTFESESLSASRNYSYEDIRDSSLYVGGASNVNDRRLSDFNV
KTNSTQFPYNPSCEESKNQRSAAEASPATDKLIQQALRDGGLESLAEDPQFVSVTRKELA
EAVNIGLQDIESVAQGIVNGQSGKVTKRKRRPIPVPPSKTKEATSAV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaggcggtggtggtggtggtggaggtcctgggggtggtggagtggcaggcttg
gcctcgttcatcatgaacgaagaagaactgaagagaaaacaaagggagaagctgaagaaa
ctgctggccaccggaggaaaccctcgacctccacgtacattgttcttcttcaagctcaga
aaccctttccggaaggcttgcaccaacattgtggaatggaaaccttttgagatcattatc
ctgctaaccatcttcgctaactgtgtagctcttgctgtgtttctgcctatgcccgaagag
gacaccaacaacaccaacttaacattggagagtctggagtacatctttctggtcattttc
actctggagtgcttcttaaagataatagcatacggcctcttgttccatgaaggagcctat
ttacgaaattgttggaatatattggactttgtcattgtgttcatggggctcttcacactt
gttgtagacaccatcgacacaataacaggagttcagaaagagaaaggcggaggcttcgac
atgaaagctctcagagcgtttcgagtcttgagacctctgcgcctcgtctctggagttcct
agcctgcaggtggtgatgagctctgttctgaagtccatgttgccccttttccacatttta
ttgctggtctttttcatggtcaccatttatgccattatgggtttggagcttttcaagtgt
aaaatgcacaagacttgctactaccagggcaccaacattattgccctcagggagaatgag
aagccttcaccctgcgctcaggctggaaacgggcggcgctgcaccatcaatggcactgaa
tgccgtgacggatggcctggtcccaattttggcataacccactttgacaactttggcttt
gctatgctcacggtctttcagtgcatcaccacagagagctggacagatgtgctctactgg
attaatgatgccatgggaaatgactggccttggatctatttcttgtctctgataatgctg
ggctccttcttcatccttaaccttgtccttggagtactgagcggggagtttacaaaagag
agggaaaagtcacggtcacgaggagaatggcaagtacttcgagaacgacaacaaatggat
gaagatctgaagggttacatggaatggatcactcatgctgaagttatggatggagactct
gatgctatgctgcttcttagaaaggacactggctcagagacagatagtttatataagatg
gaggggatcaacaaggtggtctatttctaccgtctggcgcgccgctggaacattgttata
cggagaaagtgtcatggctgggtgaaatcaaagtccttcaactggtgggttctgatcgtt
gtgttgctgaacactctggtcattgccacagagcatcataaccagacagagggcttaacg
aactttcaagacaccgccaatgtaatcctgctcgcctgttttacgattgagatgattatg
aagatgtatgcattcggtccgagaagctactttatgtccatctttaaccggtttgactgt
ttcgtggtcaccatcggaatactggagatcatcctggtcgggtcaggcatcatgacacca
ctgggaatctctgtgatgagatgcattcgactcctgcgcttattcaagctcacaaagtac
tggacatctcttaataacttagtagtatctctactaaactcagtgaaatccattgcctcc
ttgctcctgctcctttttcttttcatcgtcatcttcgctctgctggggatgcaggtgttt
ggtggcaaattcaactttcctgacagaccgatccagcgcagcaacttcgacaacttccca
caggccctcatcagtgtcttccaggtcctgaccggagaggaatgggacacaatcatgtat
aatggcataatggctcatggtggacccaaatctccaggaatcctcgtcagcatttacttt
ataatactatatgtctgtggaaactttgttctcttgaacgtgtttttggccatcgctgtg
gacaatcttgccgaagctgagagtctggcagccgcacagaaagagagagcggaggaaaga
gccagaaaaaagctcatgaaaccattgccagagaaaactgaggaggagaaagccctgatg
gccaagagactaatggagtccaggcaaaaaactgaaggaatgcccaccacagcgaagctc
aagattgacgagtttgaatcaaacgtgaatgaagtgaaggacccctttcctcctgctgac
tttccaggtgatgatgaagaagaggaaccagagatcccgatcagccccagacccagaccc
atggctgacctgcagttaaaagagactgtggtgcccatgcctgaagccagctccttcttc
atcttcggccctcagaacaagttccggaagctctgccacaggatcatcaaccacacaacc
ttcaccaacatcatcctcctcttcatcctcctcagcagtatctccctcgctgctgaagac
cccatcgacccccactcattcagaaacaaggtcttggcttacgcagacatcgtcttcaca
acggtcttcaccattgagattgtgctaaagatgacggtgtatggagcgttcctgcatccc
ggctccttctgccgaaactccttcaacattctagatctcattgttgtggctgtttctctc
ctgtctatgggaatggagtctagtaccatctcagtagtgaagattctcagggtgttgagg
gtactcagacctttaagagccatcaacagagccaaaggattgaagcacgtggtccagtgt
atgtttgtggccataaaaaccattggcaatattgtcttggtcaccatgctcttggacttc
atgttctcctgcataggagtgcagctcttcaagggtacattgttctactgtacagacccc
ctgcaaaaaacagcagagcagtgtcagggaacatttttaaagcatgtgcaaaattccctt
cacgacacagagatccatcagcgcagatgggtcaacagcgacttcaactttgacaatgtg
ctaaatggcatgctggctcttttcactatctccacatttgaaggatggccagagatccta
tataaggccatagactcatatgacgtggacacaggcccgctgtacaataaccgtgtggga
atctccatattcttcatcatctacatcatcatcatcgccttctttatgatgaatattttt
gtgggcttcgtcattgtcactttccaaagacaaggagagcaggagtacaagaactgtgag
ctggataaaaaccagcgtcagtgtgtgcaatatgctctgaaagcacgacccctcaaatgc
tacatcccggagaacccgcatcagtaccgtgtgtggtaccttgtgacctcctgctacttt
gagtatctcatgttctttctcatcatgctcaatactctgagtcttggaatgcagtactgt
aaccagcctttttatataaccaaactctctgacaatctgaacgtcatctttacggttctg
ttcactggtgagatgattgtcaaactcatcgctttcaaagcaaaggggtactttggagac
ccttggaatgtgtttgatttcgtcattgtcatcggcagtatcgttgacgtggtcctgagt
gaggttgatagaacactggaggccagtggaggactgtggtgtctacatggttgtagtgag
gtggatccgatgcaggcaattgcggaggcagaaaatgttaaattgtccatcacattcttc
cgtctcttccgtgtgctgcgtctcattaaactgctcaatcgctcagagggcatcaggaac
ctgctgtggaccttcattaagtccttccaggctctgcctcatgtgggtctcctcatagtc
atgcttttcttcatctatgctgtcatagggatgcagatgtttggtaaaattgcactggtt
gatggtacagaaatcaaccgcaacaacaacttccaaactttccctcaagctgttttgcta
ttgttccgggttgccactggagagcagtggcctaaaatcatgctggcctcaatgtacgga
aagctctgtgaccctaaatcagactacggccctggggaggagtatacctgcggctccagc
atcgctgtctgttacttcctcagcttttatatgctgtgtgcatttttggtgatcaacttg
tttgtggctatcataatggacaattttgactacctcacccatgattggtcaatccttggg
ccgcatcacctggatgaattcaagaagatctggggagagtatgaccctgaagcgacgggg
cgaatcaaacatttggatgttgtcactcttctgcgaaggattcagccaccattgggtttt
ggtaaattctgtccacatcacgcagcttgtaagcgactgatttccatgaacatgccacta
aacagtgatggcacagtgaccttcaatgccacactttttgctctggtcagaacagctttg
aaaatcaagactgaaggaaactttgagcaggccaatgaggagctgagagccatcatcaag
tcgatctggaaacggaccagtatgaagttgttggaccaggtcattccaccaattggagag
gatgaagtcacggttggaaaattctacgctaccttcctgattcaggaacatttccgcaag
tttatgcagcgacaggaggagttatatggttacaggcccaccaagaagaacgctgatgag
attaaggccggtttgcgcagcatcgaggaggaagcggcaccagagctgcacagggcaata
tcaggtgacctgatagcagaggatgagatggagcgagccatggagagcggagaggagggc
atctacaggcggacaggtggtctctttggactcaacgcggaccccttttcctctgagccc
agcagccctctgtccacacaggtcaccagccagaggcccctgcagtttgcggagaatcgg
ccggaggatgcagggtctcctccagactctgtcttcctcccaaacacagagtttttccct
gataacatgccaacaacaagcaacaccaataacaatgctaacttcattgaagagtttaca
tttgagagcgagtcactgtcagcaagcagaaactattcatatgaagacataagagactcc
agcttgtatgtgggcggagcctcaaatgttaatgacaggcggctgtcagatttcaacgtg
aagactaattctacacagttcccttataatccctcatgtgaagaatcaaagaaccagaga
tcagcagcagaagcctcaccagccaccgacaaactcattcagcaggcactgagagatggt
ggtctggagtcgttggctgaagacccacagtttgtatctgtgaccagaaaggagctggca
gaagccgttaatattggcttgcaggatatagagagcgtggctcagggtattgtcaatggg
cagagcggcaaggtaaccaaacgcaagcgacgtcctatccctgttcctcccagcaaaacc
aaggaagccacaagtgcagtgtaa
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integrated database retrieval system
