KEGG   Danio rerio (zebrafish): 405797
Entry
405797            CDS       T01004                                 
Symbol
aptx
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    405797 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    405797 (aptx)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     405797 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     405797 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     405797 (aptx)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     405797 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     405797 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_4
Other DBs
NCBI-GeneID: 405797
NCBI-ProteinID: NP_999894
ZFIN: ZDB-GENE-040628-2
Ensembl: ENSDARG00000027143
UniProt: P61799
LinkDB
Position
1:complement(52653617..52659685)
AA seq 324 aa
MPVCLLVSEDNSHKPIELHHQQSVTLGRGPDTKIKDKKCSREQVELRADCNRGFVTVKQL
GVNPTLVDDVVVGKGNQVSIKPGQSLYMVNQQYPYSVKFTEDTSRSKPSKRAQQIQSPTK
TTADVSDSPPPPKKTTPPAGEKSESAGHWSQGLKASMQDPKMQVYKDDSVVVIKDKYPKA
RYHWLVLPWQSISSLKALRSEHVELLKHMQRVADQMVEQCPDAHKLSFRLGYHAIPSMSH
VHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVISMLEHDGKVQVKEGAGELLKLPLR
CHVCGKEQTTIPKLKDHLKTHLPS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgcctgtgtgtttactagtaagtgaagataattcacacaaacccattgagctccatcac
caacagtctgtgactctgggtcgaggaccagacactaagataaaagacaagaagtgctct
agagaacaagttgaattgagagctgattgcaacaggggatttgtcactgttaaacagctg
ggtgtgaatccgacacttgtggatgatgtggttgtgggcaaaggcaatcaggtgagcata
aagccgggtcagagcctctacatggtcaatcagcagtatccttacagtgtgaagttcacg
gaggacacgtccagatccaaaccctccaaaagagcccagcagatccagagccctacaaaa
acaacagcagatgtgtcagacagcccacctccacccaaaaaaacaacaccacctgctggt
gaaaaatcggagtctgctggacactggagccaaggacttaaagcgtcaatgcaggacccc
aaaatgcaggtgtataaagacgacagcgtggtggtgatcaaggataaatacccgaaggct
cgttatcactggttggttttgccgtggcagtcgatctccagcctgaaggcactgcgctcc
gagcacgtggagctgctcaaacacatgcagcgggtggcagatcagatggtggagcaatgt
cctgatgcccacaaactgagcttccggctcggctaccacgccattcccagcatgagtcac
gttcatctgcacgtcatcagtcaagacttcgattcgccgtgtttgaagaacaagaaacac
tggaattccttcactactgactattttgtggagtctcaagatgtgatatcaatgctggag
catgatgggaaggtgcaggtgaaggagggtgcaggtgaattactgaagctgccgctgcgc
tgtcatgtgtgcggtaaagaacagaccaccatacccaaactgaaagatcacctcaaaaca
cacctgccttcataa

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