KEGG   Danio rerio (zebrafish): 405821
Entry
405821            CDS       T01004                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04137  Mitophagy - animal
dre04144  Endocytosis
dre04145  Phagosome
dre04148  Efferocytosis
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    405821 (rab5b)
   04145 Phagosome
    405821 (rab5b)
   04137 Mitophagy - animal
    405821 (rab5b)
   04148 Efferocytosis
    405821 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    405821 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    405821 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    405821 (rab5b)
   04031 GTP-binding proteins [BR:dre04031]
    405821 (rab5b)
Membrane trafficking [BR:dre04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    405821 (rab5b)
 Endosome - Lysosome transport
    405821 (rab5b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   405821 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   405821 (rab5b)
  Exosomal proteins of colorectal cancer cells
   405821 (rab5b)
  Exosomal proteins of melanoma cells
   405821 (rab5b)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    405821 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 405821
NCBI-ProteinID: NP_998050
ZFIN: ZDB-GENE-040426-2593
Ensembl: ENSDARG00000016059
UniProt: Q6NYD6
LinkDB
Position
9:29423892..29450012
AA seq 214 aa
MSTRGTGRANGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagtacccgtgggacaggcagggccaatgggaacctaccgcagaccaagatctgccag
tttaaactggtgctgctgggagacatggccgtcggcaagtccagcctggtgctgcgcttt
gtgaagggacagtttgatgagtttcaggagaccaccattggagctgcattcttggcccag
tctgtttgtctggacgacactacagtgaagtttgagatttgggacacagccggacaagag
cgctaccacagcttggctcccatgtactaccgtggagcccaggcagccattgtagtgttt
gatatcactaaacctgaaacatttgagcgagcaaaagcatgggtgaaagagctgcagcgg
caggccagtcccaacatagtcattgctcttgcaggaaacaaagccgatctagcagacaag
agacttgtggagtatgaggaagcccagacatatgcagaagacacaggtttactgttcatg
gaaacctctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccctacgcatgctgcgcgacacaggggcgtgaacctg
caggacccagacgcacagtccactcgaagctgctgtgggaactaa

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