Danio rerio (zebrafish): 405821
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Entry
405821 CDS
T01004
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04144
Endocytosis
dre04145
Phagosome
dre04148
Efferocytosis
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
405821 (rab5b)
04145 Phagosome
405821 (rab5b)
04137 Mitophagy - animal
405821 (rab5b)
04148 Efferocytosis
405821 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
405821 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
405821 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
405821 (rab5b)
04031 GTP-binding proteins [BR:
dre04031
]
405821 (rab5b)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
405821 (rab5b)
Endosome - Lysosome transport
405821 (rab5b)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
405821 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
405821 (rab5b)
Exosomal proteins of colorectal cancer cells
405821 (rab5b)
Exosomal proteins of melanoma cells
405821 (rab5b)
GTP-binding proteins [BR:
dre04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
405821 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
405821
NCBI-ProteinID:
NP_998050
ZFIN:
ZDB-GENE-040426-2593
Ensembl:
ENSDARG00000016059
UniProt:
Q6NYD6
LinkDB
All DBs
Position
9:29423892..29450012
Genome browser
AA seq
214 aa
AA seq
DB search
MSTRGTGRANGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccgtgggacaggcagggccaatgggaacctaccgcagaccaagatctgccag
tttaaactggtgctgctgggagacatggccgtcggcaagtccagcctggtgctgcgcttt
gtgaagggacagtttgatgagtttcaggagaccaccattggagctgcattcttggcccag
tctgtttgtctggacgacactacagtgaagtttgagatttgggacacagccggacaagag
cgctaccacagcttggctcccatgtactaccgtggagcccaggcagccattgtagtgttt
gatatcactaaacctgaaacatttgagcgagcaaaagcatgggtgaaagagctgcagcgg
caggccagtcccaacatagtcattgctcttgcaggaaacaaagccgatctagcagacaag
agacttgtggagtatgaggaagcccagacatatgcagaagacacaggtttactgttcatg
gaaacctctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccctacgcatgctgcgcgacacaggggcgtgaacctg
caggacccagacgcacagtccactcgaagctgctgtgggaactaa
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