Danio rerio (zebrafish): 405851
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Entry
405851 CDS
T01004
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
405851 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
405851 (spast)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
405851 (spast)
Membrane trafficking [BR:
dre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
405851 (spast)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
405851 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
MIT
TIP49
IstB_IS21
Mg_chelatase
AAA_14
AAA_16
DUF815
nSTAND3
AAA_2
NPHP3_N
AAA_24
Motif
Other DBs
NCBI-GeneID:
405851
NCBI-ProteinID:
NP_998080
ZFIN:
ZDB-GENE-040426-2331
Ensembl:
ENSDARG00000024933
UniProt:
Q6NW58
LinkDB
All DBs
Position
1:complement(51021276..51038879)
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AA seq
570 aa
AA seq
DB search
MNSGHKARLRGGRACGPVSDGSARGNRLLFYTRSLSRVPEWLLRVLLLLLRWLFQPIRRA
MAARAKECGPDGSEETGERIRNYHKQAFEFISVALQIDEDEKGDKQKAVQWYRKGIAELE
KGIQIQVTGAGEKADRARKLQDKMITNLSMAEDRLKLLGNLLSQSPAESSSDDSFYSFSN
GNLRPAPASGAVSKKKDTLTITNQTSLRPKNPPKSTPNASGLNCTPSAAQSSRTGPQNNQ
KGPTVKGKNNVKASTTATASPQRKRDMKNFKNVDSKLASLILNEIVDSGSVVRFDDIAGQ
DLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNIS
AATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLI
EFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRN
PLSQKELSQLARLTDGYSGSDLTSLAKDAALGPIRELKPEQVRNMSAHEMRDIRISDFLE
SLKRIKRSVSPQTLDQYVRWNREYGDTTGV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgggcacaaagcgagactcagaggaggacgcgcttgcggtccggtgtctgac
gggagcgcgcgggggaaccggttgctcttttacacccgctccctgtccagggtcccggag
tggttgctgcgggtgctgctgctgcttcttcggtggctgtttcagccgattcgacgagcc
atggcggcccgggccaaagagtgcggccccgacggcagtgaagagaccggagagcggatc
cgaaactaccacaaacaagccttcgagttcatttctgtggctctgcagatcgacgaggac
gagaaaggtgataagcagaaggcggtgcagtggtacagaaaaggcatcgctgaactggag
aagggcatccagattcaggtcactggagctggcgagaaggcagacagagccagaaaactc
caggacaaaatgatcaccaacctgtccatggccgaagaccggctgaagcttctgggcaat
ctgctttcacagtctccagcagagagcagctctgatgattctttctactctttctccaat
ggtaatctgcgtccagctccagccagtggagcagtctccaagaagaaggacactctcaca
atcacaaatcaaacttctctgcggcccaaaaatcctcccaaatctaccccgaatgcatca
ggtctgaactgcactccctcagcagctcagagcagcaggaccggccctcaaaacaatcag
aaggggcccacagtcaaaggcaaaaataatgttaaagccagtaccactgccactgcgtca
cctcaaaggaaaagagacatgaagaacttcaaaaatgtggacagcaaactggcaagcctc
atcctcaacgagatcgtggacagcgggtctgtggtgaggtttgatgatatagcaggacag
gatttggccaagcaggcgctgcaggaaatcgtcatcctgcctgccctacgtccagagttg
tttactggtctccgggctccagctagaggactcctgctcttcggccctcctggtaatggg
aaaaccatgctggcgaaagccgtcgcaatggaatcgaatgctactttcttcaacatcagc
gctgccactctcacctccaaatatgtgggagagggagagaagctggttcgagctctgttt
gcggtcgctcgagagctgcagccgtcgattatcttcatcgatgagatcgacagtctgctg
tgtgagaggagggaaggcgaacacgatgccagcagacgactcaaaacagagtttctcatc
gagtttgatggagtgcagtcaggtggagatgagcgtgtgttagtgatgggagccactaac
aggcctcaggagctggacgaggctgttctcaggagatttgctaaacgcatttatgtggct
ttacctacagaggagactcgactgaagctgctgaagaatctcctcagtaaacacagaaat
cctctgtctcagaaagagctcagtcagctggccaggctgaccgacggttactctggcagc
gatctcacctctctggctaaagacgctgctctcggcccgatacgagagctgaagccggag
caggtgaggaacatgtcagcccatgagatgcgtgacattcgcatctctgatttcctggag
tctctgaagcggatcaagcggagcgtcagtccgcagaccttggatcagtacgtgcgctgg
aaccgcgagtacggagacacgactggcgtatga
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