Danio rerio (zebrafish): 406288
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Entry
406288 CDS
T01004
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
406288 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
406288 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
406288 (srsf1a)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
SR proteins
406288 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
CoV_nucleocap
Nup35_RRM_2
SDP_N
Motif
Other DBs
NCBI-GeneID:
406288
NCBI-ProteinID:
NP_998180
ZFIN:
ZDB-GENE-040426-1950
Ensembl:
ENSDARG00000057691
UniProt:
Q7SXP4
LinkDB
All DBs
Position
15:complement(18503226..18507564)
Genome browser
AA seq
245 aa
AA seq
DB search
MSGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGAPRG
RYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTY
AVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSPRR
SRGSP
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtggtgtgatccgcggccctgctggaagcaacgattgccgcatctatgtggga
aacctgccgcccgatattcgcaccaaagatgtcgaagatgtgttttataagtacggagcc
atccgagacatcgatctgaaaaaccgacgaggcggacctccattcgcctttgtcgagttt
gaagaccccagagatgcagaggatgctgtttatgctcgtgatggctatgactatgatggc
tatcgacttcgagtggaatttcctaggagtggacgaggaatgggcagaggaggttttggt
gggggtggtggaggcggtggcggcggaggaggaggtggtggtggggctcctagaggtaga
tatggacccccatccagacgttcagagtacagagtaattgtttcaggacttccaccaagc
ggcagctggcaggatctgaaggatcacatgcgtgaagcaggtgatgtatgttacgctgac
gttttccgagatggaactggtgtggtggagtttgttcgcaaagaggacatgacctacgcc
gttcgcaaactggataacacaaaattccggtcccatgagggagaaactgcgtacatccgc
gtaaaggtggacggaccccgcagtccaagctatggaagatcaaggtcaaggagccgcagt
cgcagcaggagtcgcagccgcagcaacaaccgtagccgaagctactctccacgccgcagc
cgaggatccccttga
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integrated database retrieval system
