Danio rerio (zebrafish): 406352
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Entry
406352 CDS
T01004
Symbol
hnrnpc
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X8
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
406352 (hnrnpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
406352 (hnrnpc)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
hnRNP proteins
406352 (hnrnpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_pol_3_Rpc31
RRM_5
CDC27
UPF0688
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
406352
NCBI-ProteinID:
XP_017213535
ZFIN:
ZDB-GENE-040426-2043
Ensembl:
ENSDARG00000053810
UniProt:
A0A8M6Z8V1
LinkDB
All DBs
Position
2:41045385..41057999
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AA seq
312 aa
AA seq
DB search
MDRASSASQLIASNVTNKTDPRSLNSRVFIGNLNTMLVTKADVEAIFSKYGKIVGCSVHK
GYAFVQFAQERNARTAVQGEDGRMVVGQVLDVNLAGEPKPHRSKTTKRSAGDMYSSSSFE
LDYDFQRDYYDRMYSYPSRVPAPPPLSRAVIPSKRPRVSTSGATSRRTKSSFATSSKSSQ
RTSSRTLKADDLQTIKRELSQIKHKVDFLLESLDRMEKDHGKKSEGKSVKAEVGEVSPLQ
HSSKKEREREEQEINDSEEERDLLGEEEEEEEEEEVKSQGGENENEEEEGEEEEGEHEEG
EDDGDSINGDDS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgcttcgagtgcaagtcagctgattgccagcaatgtcacaaataaaacggac
ccacgatccctgaactcaagggtcttcattggaaacctaaacactatgctggtcaccaag
gcagacgttgaagccatttttagcaaatatggcaagattgttggctgctctgtgcacaag
ggttatgcttttgttcagtttgcccaagaaagaaatgctaggactgctgtacaaggagag
gatggacggatggttgtcggacaggtgcttgatgttaacttggcaggagagcccaaacct
cacaggtcaaaaactacaaagcgatcagctggggacatgtacagtagctcgtctttcgag
cttgattatgatttccagagagattactatgacagaatgtattcatacccttcccgtgtg
cctgcacctccccctctctcacgagccgtgatcccatccaagcgtccacgagtcagcacg
agcggagcaaccagtcgtcgcaccaagtccagcttcgcaacttcatccaagagcagccaa
cggacatcctctcgaaccctaaaagcagatgatcttcagactattaagagagagctttct
caaatcaagcacaaggttgactttcttctggagagtctggacaggatggaaaaggatcac
ggcaagaaatctgaggggaagagtgtgaaggcagaagttggtgaggtttctcccctccag
cattccagcaagaaagagagagagagggaagagcaagagataaacgattcagaggaggag
agagatctgctgggggaggaagaagaagaagaagaagaggaagaggttaaaagccagggt
ggagagaatgagaatgaggaagaggaaggagaagaggaagagggtgagcatgaagaaggg
gaagatgatggcgatagcattaatggtgacgactcgtaa
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