Danio rerio (zebrafish): 406418
Help
Entry
406418 CDS
T01004
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
406418 (fubp1)
03041 Spliceosome [BR:
dre03041
]
406418 (fubp1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
406418 (fubp1)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
406418 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_Vigilin
FUBP_C
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
406418
NCBI-ProteinID:
NP_998309
ZFIN:
ZDB-GENE-040426-2159
Ensembl:
ENSDARG00000029248
UniProt:
Q6P2A9
LinkDB
All DBs
Position
2:8992283..9006098
Genome browser
AA seq
642 aa
AA seq
DB search
MADYSNVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVPPSPVSNDFGYGGQKRPLE
DGDQPETKKVPPSDPFSAVMGGMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESG
CKIQIAPDSGGMPDRSVTLTGSPDAIMTAKRLLSEIVEKGRPSPAFHHNDGPGMSVHEMM
IPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMV
MDLIRDQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVR
IQFKPDDGSTPERIAQIMGPPDRAQHAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRG
RGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDP
NIKIFTVRGSPQQIDYARQLVEEKIGGPVSPMGGPHGPPGPHGGPSHGPPGPQGPPAPMG
PYNPGPYGQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPTVCSPDKAAADANAAAWAAY
YSQYQQQPQGPMTPTSAAPGTTQANGQGQGQPQQDYTKAWEEYYKKQGQAAPQAAAAATA
TQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGGAPQAQQGQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggccgactactctaacgtggctccgccgtcttcgaacgccggtggagggatgaacgac
gcatttaaagatgctcttcagagggccagacagatcgctgcaaaaataggaggtgatggg
gtaccgccctctccagtttccaatgactttggttatggaggacagaagaggccccttgaa
gatggagatcaaccagaaacaaagaaagttccaccaagtgatcctttttcagctgtaatg
ggaggcatgggtggcccaccaaggtctgtatctgaagagttcaaggtcccagatggcatg
gttggcttcatcattggaagaggaggagaacagatttcaagactgcaacaggaatctggc
tgcaaaatacagattgctcctgacagtggtggtatgcctgataggtcagtgacgttaact
ggttcaccagatgcaatcatgactgctaagaggctgctctcagagattgtagagaaaggc
agaccatctccagcgttccaccacaatgatggaccagggatgtctgttcatgagatgatg
atccctgcctccaaagcgggcctggtcattggaaagggaggggaaacgatcaaacagtta
caggaacgggctggagtcaaaatggtgatgattcaagatggaccccaaaacacaggcgct
gataaaccactcaggatctctggtgatcctttcaaagttcagcaagctaaagacatggta
atggatctgattagagatcagggttttcgtgaacagagaggagagtatggctctagagca
ggtggtggtggtggaggaggagagagtttggatgtccctgtgccaaggtttgctgtgggt
attgtgattggccggagtggcgaaatgatcaagaagattcagaatgatactggtgtgagg
attcagttcaaaccagatgatggcagcacaccagaaaggattgctcagattatgggaccc
ccagatagagcacagcatgcagcagatatcataactgatctactgaggagtgtgcaggcc
ggaggaccccctggtcatggtggtggtggcggtgggggcggcggcggcagaggaagaggc
cgtggacagggaaactggaacatgggccctcctggtggtctgcaggaatttacttttact
gtacctaccatgaagactggcctcattattggcaaaggtggtgaaactattaaaaacata
agccagcagtctggagccaggatagaattgcaaagaaaccctcctcctaattcggatcct
aatataaagatcttcacagtccgtgggtcaccccaacaaattgattatgccaggcaattg
gtcgaggagaagataggaggtccagttagccctatgggtggtcctcatggtccacctggg
ccacatggaggaccttctcatggacctcctggtcctcagggaccacctgctcccatgggc
ccttacaaccctgggccttatggccagggcccacctggaccacatggacccccagcacca
taccaacctcaaggctggggcaatggatacccccactggcagcaaggacagcctgatcct
actgtttgttccccagataaagcagcggctgatgctaatgctgcagcatgggctgcctat
tattctcagtaccagcagcagcctcagggtccaatgacacccacctcggcagccccaggc
acaacccaagccaatggacaaggtcaaggccagcctcagcaggactacaccaaggcgtgg
gaagagtactataagaagcaaggtcaagctgctcctcaagcagctgcagcagcaacggca
acacagcccggaggtcagccggattacagtgcagcgtgggccgagtattaccgccaacag
gccgcctactatggtcaaggagcccctcaggcaatgggtggtgcaccccaggctcagcag
ggccagtaa
DBGET
integrated database retrieval system
