Danio rerio (zebrafish): 406495
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Entry
406495 CDS
T01004
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
406495 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
406495 (rbm22)
Spliceosome [BR:
dre03041
]
Complex B
Other components
Prp19-related factors
406495 (rbm22)
Complex C
406495 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH_10
RRM_PARP14_3
Calcipressin
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
406495
NCBI-ProteinID:
NP_998379
ZFIN:
ZDB-GENE-040426-2298
Ensembl:
ENSDARG00000010238
UniProt:
Q6NZZ9
LinkDB
All DBs
Position
21:complement(35891673..35911528)
Genome browser
AA seq
425 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKGEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLAPTPSPAVM
NLGLPPPPGVTMPPPPGFGPPMFHTMDPMAPPVPPPMALRPPGQVHYPSQDPQRMGAHAS
RHGGP
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttgggatccaacacttataacaggcaaaactgggaagattcggatttt
cccatcctctgtcaaacatgcttgggagaaaacccttacattcgcatgacgaaagagaaa
tttggcaaggagtgcaagatctgtgcacgtcccttcacagttttccgctggtgtcctgga
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgtagtaaaatgaagaacgtt
tgtcagacctgcctcctagatctggaatatggtttgcccattcaggttcgtgacactggg
ctctccgttaaggatgaagtaccgcgatctgatgtgaataaggagtattacactcagaat
atggaaagagagattgccaactctgatggcacgagacctgtgggtttgcttggaaaggct
ccgagcagcagtgatatgctgctgaaactggcgcgcaccacaccgtactacaagaggaac
agaccacacatctgttccttctgggttaaaggagagtgcaaaagaggagaagagtgtccg
tacaggcatgaaaaacccactgatccagatgaccccctggctgatcagaacattaaggac
cgatactatggaattaatgatcctgtggctaataaactgctgatgcgagcctccaccatg
cccagactggacgtaccggacgacaagtccataaccacactttatattggaggcctggga
gaaaacgtcacagactcggagctccggaatcacttttaccagtttggagagattcggacc
atcactattgtccagaggcagcagtgtgcttttattcagtttgccactcgacaggctgca
gaaacagctgcggagaagtccttcaataaactcatcatcaatggacgtcgtcttaatgtt
aaatggggcaggtcccaggcggcacgagggaaaggagagaaggacggggtgacggagagt
ggcatcagactggagccggtgccagggcttcctggtgctctgcctccaccacctgtctct
gatgaagatgcgtccaccaattacttcaatctggctcccacaccctcccctgctgtcatg
aacctgggtcttcctcctccacccggggtgaccatgcctcctccacctggatttggtcct
cctatgttccacactatggaccccatggccccgccggtgccacctccaatggccctgaga
ccacccggacaggtccactacccatctcaggatcctcagaggatgggtgcccacgccagt
cgccatggaggcccctag
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