Danio rerio (zebrafish): 406510
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Entry
406510 CDS
T01004
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
406510 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
406510 (nup58)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
406510 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
GCP_N_terminal
Nup49_C
PSY3
FapA
JAKMIP_CC3
Motif
Other DBs
NCBI-GeneID:
406510
NCBI-ProteinID:
XP_005162738
ZFIN:
ZDB-GENE-040426-2326
Ensembl:
ENSDARG00000033965
UniProt:
A0A8M2B9R7
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All DBs
Position
24:complement(28972359..28991474)
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AA seq
600 aa
AA seq
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MSSFNFGTTTLGTTGAPAAAGGGGFSFGAATSTPAAGTGGFSFGGFGAQTSTPAPATTST
TSTLGFGTSLFAQKPTTGFSLSTPASAAAASTSGLSLGSLTTSTAASTGFSLGFGKPAAS
ATPFSLTTTTASAPAATGLSLGSVLTSTVPQTSSTGFSLNLGAAAATSSAPASGFSFGSS
LFSNPTLTGLGQSTLGGPLSLGGLVSTSVATTSAPAPSLGLGGVDFSTSSEKNTDKLSST
RPEDSKALKDENLPAPICQDVDNFQKFVKEQKQVQEEISRMSSKPILKVQEDIKMLRQLL
SVCASGLQRNSLSIDKLKLETSQELKNADIALRTQKTPPGLQHENTAPSDYFRALVEQFE
VQLQQYRQQIEELENHLTTQGSGSHITPQDLSMAMQKLYQTFVALAAQLQGVHENVKTLK
HQYLGYRRAFLEDSTDIFESKRVAGKKWQSSPRVTTGPAPFGSVPNAAAVAMAATLTQQQ
QPAPGPQAPLGASFGTPFSSGIGSSMGSSSLGAFGSGPGFGGVASGGLSFGFSSSKPSGG
SLSAGFGTSNTSGFNFSNPGINASAGLTFGVSNTQTPGFGAGGPLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctttaacttcggcacaactaccctcgggaccaccggagcaccagcagcagct
ggaggaggagggttttcatttggagctgcgaccagcacacctgctgcaggcacaggtgga
ttctcatttggaggtttcggggcacagacctccacaccggcacccgccaccaccagtacc
acctccacattgggatttgggaccagtttatttgcacagaaaccaacaactggattcagc
ttgagtacacctgcctcagcagctgctgcatccacaagtggcctttcgttagggagtctt
accacctcgaccgctgcttccactggcttcagtttgggctttggaaagccagcggcctca
gctacacctttctctctaaccaccaccaccgcctctgcacctgcggcaacaggcctctct
ctgggatccgtcctcacctccacagttcctcagaccagctccactggcttttccctcaac
ttaggagcagcagcagccacttcctctgctcctgcatcaggtttctcctttggatcaagt
cttttctccaaccccactcttacaggtttgggacagtccactttaggtggacctttgagt
ctgggcggtttagtctctacctctgtcgcaaccacctcagctcctgctcccagtctcggc
ctgggtggagtagacttcagtacttcctctgaaaagaacacagacaagttgtccagcacc
agacctgaggacagtaaagcccttaaagatgaaaacctgccagctccgatctgtcaagat
gtggacaattttcagaaatttgtcaaggaacagaagcaagtccaggaggagattagcaga
atgtcctctaaacccattctcaaagttcaagaggacatcaagatgctcagacagctcctg
tccgtctgtgccagcgggctgcagagaaattccctctccatagataaattaaagctggaa
acttctcaggaattgaaaaatgctgatattgcgcttcgcacccagaagaccccgcctgga
ctccaacatgaaaacacagcaccatcagactatttccgggcactggtggagcagtttgag
gtgcagttacagcagtaccgtcagcagattgaagaactggagaatcatctgaccactcag
ggcagtggctcccacatcacccctcaagatttgtcgatggctatgcagaagctataccag
acatttgttgcgcttgctgctcagttgcagggagttcatgagaatgttaaaactctaaag
catcagtacctgggctacagacgagccttcctagaggactccactgacatcttcgagtcg
aaacgtgttgctggcaagaaatggcagagttctccgcgtgtcaccacaggccccgccccc
ttcggcagcgttcccaatgcagcggccgtagccatggctgccactctcactcagcagcag
cagccggctccaggaccacaggcacccttgggagccagttttggcactcccttttcctcg
ggtattggctctagcatgggctcatccagcctcggagcgtttggtagcggccctgggttc
gggggtgtggcgtcaggaggtttgtcgttcgggttttcctctagcaagccatctggaggg
agcctgagcgcagggtttggaacttcgaacacgtccggctttaatttcagcaacccaggc
atcaacgcttccgccggattgacttttggtgtttccaacacccagactcctggtttcggg
gcaggagggccactgctacagctcaaaaagccaccagccggaaacaagaggggcaagaga
taa
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