Danio rerio (zebrafish): 406511
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Entry
406511 CDS
T01004
Symbol
sort1a
Name
(RefSeq) sortilin precursor
KO
K12388
sortilin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
406511 (sort1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
406511
NCBI-ProteinID:
NP_998395
ZFIN:
ZDB-GENE-040426-2329
Ensembl:
ENSDARG00000029402
UniProt:
Q6NUT7
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Position
11:complement(38678489..38735893)
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AA seq
814 aa
AA seq
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MSTVLCCVLVLLISVALCMDFEERPSSSWRSEQTMFLKSHKSRNLLSLRDLQQPDHGKMK
RSEESAQNQCESLHGYQSTLQNDTHTHNFNDLSGSVSLAWVGDGTGVLLVLTTFQVPLFI
MRFGQSKLYRSEDYGKTFQDITDLINNTFIQTEFGIAIGPDNSGKVILTGDLAEGKVTKI
FRSVDFGKSFVTSELPFHPLMQITYNPKDSNILMVYSINYDLWLSKDFGANWKKIHESVC
LVKWGIDDTIFLTTNPNGSCSDRGTLELRKSLDYGKTFKTIGNRIYSFGLGGRFVFASIM
TDSGSTRMIHVSVDQGETWDMAQLPTVGHEQFYSILAANNDMVFMHVDEPGDSGIGTIYI
SDDRGIVFSKSLERHLYTTTGGDTDFTNITSLRGVYITSVLAEDGSVQTVITFNQGGEWR
PLMKPWNGVCDSTAKHPSECSLHIHASYSISMKLNVPMQPLSETNAVGLVLAHGSVGGAV
SVLSPDVYVSDDGGYTWFQALKGPHHYAILDSGGLLVAVEHNPTHPISQIKFSTDEGQCW
HAHNFTDDPIYFTGLASEPGARSMNVSLWGYRDTILNQYWVSVTVDFRQLLSRDCQENDY
IQWLAHSSDINSPTDGCVLGYKERFLRLRRDSVCWNGRDYKVTKEPTTCPCTLTDFHDFG
FYHEENSSVCVEQPDLIGHSLEFCLHGRKEQLQTSGYRKIPGDHCEEGITPERKEIDLSK
KCVSNLLRTEQLTKEHSFNSAPIIAVVIIVLLISAVAGVIFIKKYVCGGRFLVHRYSVLQ
QHAEANGIDGLDDLDTLEGGKTHYHDDSDEDLLE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtgttgtgctgtgttttggtgttattaatctcagtggctctttgcatggac
tttgaagagagacccagcagctcctggaggagtgaacaaaccatgtttctaaagagtcac
aaatcacgaaatctgctcagtttgagagatttacagcaaccggaccatggcaagatgaaa
agaagtgaagaatccgcacaaaatcaatgtgaatcattgcacggctatcaatctacatta
caaaacgacactcacacgcataacttcaatgacctgagtggttcagtgtctttggcctgg
gttggagatggaacaggggtcctgctggttttgaccacattccaggtccctcttttcatc
atgcgctttggtcagtccaaactctacagaagtgaagactatggaaagacatttcaggac
atcacggacctcattaacaacaccttcatacagacagagttcggcatcgcaattggccct
gacaattccggcaaggtgatcctcacaggggatttggctgaggagaaagtcaccaaaatc
ttccgctcggttgatttcggcaaaagctttgtgacctctgagcttcccttccatccgtta
atgcagatcacttacaatcccaaagacagcaacatactcatggtctacagcatcaattat
gacttatggctgtcgaaggactttggagccaactggaagaagatccatgagagtgtttgt
ctagtaaaatggggaattgatgacaccattttcctaaccacaaaccccaatggatcctgc
agtgaccgggggactctggaattgaggaaatcattagactatggcaaaacattcaaaact
ataggaaacaggatttattcttttggcctgggtggacgctttgtttttgcatccatcatg
acagattcgggttccacacggatgattcatgtgtctgtggatcagggggagacgtgggat
atggctcagctgcccactgttggccatgaacagttctactccattttagctgcaaacaat
gatatggtcttcatgcatgtagatgaacctggagactctggcattggtaccatatacata
tcagatgatcgaggtatagtgttttccaagtctctggagcgtcatttgtacaccactaca
ggcggcgacaccgacttcaccaacatcacctctctgagaggcgtctatataaccagcgtc
cttgccgaggacggctcagtgcggacggtgatcacgtttaatcagggtggagaatggagg
cctctgatgaagccctggaatggagtgtgtgactccaccgccaaacatcccagtgagtgt
agtctgcatattcacgcctcctacagcatctctatgaaactgaatgtgcctatgcagcct
ctctccgagaccaacgccgtgggactcgtcctggcacacggcagtgtcggaggagccgtc
tctgtgctttctccagacgtgtacgtgtcagatgacggaggctacacgtggttccaggcg
ctgaaaggcccccatcactacgccatcctggattcaggaggactgctggtggcggtggag
cacaaccccacacaccccatatcacagatcaaattttccactgacgaaggccagtgttgg
catgtgcataacttcactgatgatccaatatacttcactggcctggcatcagaacctggt
gcccgatccatgaatgtcagcttgtggggctacagggacaccatcctgaatcaatactgg
gtttctgtcactgtcgacttcagacagctgctctctagagactgccaggagaatgactac
atccagtggctcgctcactcaagcgatatcaacagccccacggatggatgcgtgctggga
tacaaggaaaggtttttacggttgcgaagggattcggtctgctggaatggacgggattat
aaggtcaccaaggagcccaccacatgtccctgcactctgacggactttcatgattttggg
ttctaccatgaggaaaacagctcagtgtgtgtggagcagcctgaccttattggccattca
ctggagttctgtctgcatggacgcaaagagcagcttcaaaccagcggttaccggaaaata
cccggtgatcactgtgaggaaggaataactccagaacggaaagagatcgacctgagtaag
aaatgtgtcagtaatctgctgaggacagagcaactgacaaaggaacactcattcaattca
gctcctataatcgccgtggtcatcattgttctgttgatcagtgctgttgctggggtcatt
ttcatcaaaaaatacgtctgtggaggaagattcctggtgcacagatactccgtattacag
cagcatgcagaagcaaatggtatagatggtttggatgacctggacacactggaggggggc
aaaacgcactatcatgatgattcagatgaggaccttctggagtga
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