Danio rerio (zebrafish): 406543
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Entry
406543 CDS
T01004
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2 isoform 2
KO
K14396
polyadenylate-binding protein 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
406543 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
406543 (pabpn1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
406543 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
406543
NCBI-ProteinID:
NP_001098602
ZFIN:
ZDB-GENE-040426-2401
Ensembl:
ENSDARG00000045373
UniProt:
Q6NUT4
A7YYD9
LinkDB
All DBs
Position
24:complement(16027129..16045352)
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AA seq
232 aa
AA seq
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MAEFGNGLAEESLLDSDPGHSELEDPGVGDEEPGLDEGEAAIEDPELEAIKARVREMEEE
AEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKIEADGRSIYVGNVDYGATAEELEAHFHG
CGSVNRVTILCDKFTGHPKGFAYIEFADKESVRTAMALDESLFRGRQIKVGAKRTNRPGI
STTDRGFPRARFRSRGGNFSSRARYYSGYTPPRGRGRAFRGRGRTTSWYSPY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtttggtaacggactggcagaggagtctctgctggactcagacccgggtcac
tcagaacttgaagacccaggcgttggcgatgaagaaccgggattagacgagggggaggcc
gctattgaagatccggagctggaggcaattaaagcccgggtgagagagatggaggaggag
gcagagaaactgaaggagctacagaacgaggtggagaaacagatgaatctcagtcctcca
cctgctggccctgtcattatgtccattgaagagaagatagaagccgacgggaggtctatt
tacgttggaaatgtggattatggtgctacagctgaggagttggaggcacatttccatggc
tgtggatctgtaaacagagtcactatcttgtgtgataagtttacaggacatcccaaaggg
tttgcttatatagagtttgcagacaaggagtctgttaggacagccatggcactggatgag
tccttatttagaggaaggcagattaaggttggggccaagagaacaaatcgtcctggcatt
agcaccacagaccgcggtttccctcgggcccgcttccgctcacggggaggaaacttctca
tcccgggcgcgttactacagtggctacacaccccccagaggcagaggacgggccttcagg
ggccgagggcgaacaacatcgtggtactccccttactaa
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integrated database retrieval system
