Danio rerio (zebrafish): 406612
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Entry
406612 CDS
T01004
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
406612 (rnf170)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
406612 (rnf170)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
406612 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
406612
NCBI-ProteinID:
NP_999915
ZFIN:
ZDB-GENE-040426-2572
Ensembl:
ENSDARG00000104069
UniProt:
Q7SZN2
LinkDB
All DBs
Position
5:complement(668943..674027)
Genome browser
AA seq
266 aa
AA seq
DB search
MEGSVCVDGAAAPAPDEASLIEGVSNAVLLVLVLSVTLLAGLTTLLCRSEQQRIHPESQE
RVRVVREQLQAEQVSSESRHQFYSDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRYGT
WLGAISCPICRQMVTLLFPLFQDSEQSAVAADSPVEPTLILTDISDYNRRFSGQPRSLLD
RLRDVPTLLRHAFREMFSVGGLFWMFRVRILLCVCGALAYLVSPLDFLPEGVLGLLGFLD
DFFVILLLFIYISIMYREVVTQRLAG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaggggagtgtgtgtgtggatggagctgcagctccagctccagatgaggcgtctctg
atcgagggtgtgagcaacgctgtgctgctggtgctggtgctcagtgtcacactgctggcc
ggactcaccacactgctctgcaggagcgagcagcagcggatccacccagagagtcaggag
cgtgtgcgtgttgtgcgagagcagctgcaggccgagcaggtgtcctcagagtcccggcat
cagttttactctgacatgtcgtgtcccgtgtgtctccagcaggctgttctgcccgttgag
accaactgcggacacctgttctgcggctcctgcattattgcgtactggcgttatgggaca
tggctgggtgccatcagctgtcccatctgcagacagatggtgacgctactcttcccgctc
ttccaggactcagagcagagcgcggtggcggcagactcactggtggagcccacactgatc
cttaccgacatcagcgactacaaccgcagattctctggacagccacgctccctgctggac
cggctgcgggacgtccccacactgctccggcatgcgttcagagagatgttctcggtgggt
ggtctgttctggatgttccgcgtgcgcatcctgctgtgtgtgtgcggcgcgctggcgtac
ctggtgtccccgctggacttcctgcccgagggtgtgctggggctgctgggattcctggac
gacttcttcgtcatcctgctgctcttcatatacatctccatcatgtaccgcgaggtggtc
acgcagcggctggccggatga
DBGET
integrated database retrieval system
