Danio rerio (zebrafish): 406691
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Entry
406691 CDS
T01004
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
406691 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
406691 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
406691 (srsf2a)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
SR proteins
406691 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
406691
NCBI-ProteinID:
XP_073773635
ZFIN:
ZDB-GENE-040426-2706
Ensembl:
ENSDARG00000057484
LinkDB
All DBs
Position
12:complement(33615951..33619661)
Genome browser
AA seq
225 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDAHYSRRGAPPRRYGGYGRRSRSR
SPRRRKHSRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSRSRSKTRTPRRSKSKSPSR
SRSRSKSKSHSRSRTPRSNKGSKSRSRSRSRPKSPEATDDAAVES
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagctacggcagaccaccgcccgacgtcgagggcatgacatctttaaaagtcgacaat
ctgacataccgcacgtctcctgaaacgctgcggcgggttttcgagaaatacggccgagtc
ggagacgtctacatcccaagagaccggtacacaaaagagagccgcggattcgcctttgtc
cgtttccatgataagcgggacgcggaggacgcgatggatgccatggacggcgcattgctg
gacgggcgcgagctgcgcgtgcagatggcgcgatatgggcgcccgccagacgcgcactac
agccgccgcggagccccgccgaggagatacgggggatatggacggagaagtcgaagccgt
agtcctcggcgcaggaagcacagcaggtccagatccagaagcaggagccggtctcgttcc
cgaagcaggtcccgctacagccgatccagatcccggtcttactctcgttcccggtctcgg
tcccgatcccgctccaaaacccgcacccctcgcagaagcaagtcaaaatcaccttccagg
tcccgctcaaggtccaagtccaaatctcactccaggagccgcacccccagatcgaacaaa
ggatccaaatccaggtccagatcaagaagcagacccaagtctccagaggctactgatgac
gctgctgttgaatcgtga
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