KEGG   Danio rerio (zebrafish): 406800
Entry
406800            CDS       T01004                                 
Symbol
lsm14ab
Name
(RefSeq) LSM14A mRNA processing body assembly factor B
  KO
K18749  protein LSM14
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    406800 (lsm14ab)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     406800 (lsm14ab)
SSDB
Motif
Pfam: LSM14 FDF SM-ATX GRP
Other DBs
NCBI-GeneID: 406800
NCBI-ProteinID: NP_999937
ZFIN: ZDB-GENE-040426-2462
Ensembl: ENSDARG00000100553
UniProt: Q6P0B2
LinkDB
Position
18:2619260..2641928
AA seq 448 aa
MSGGTPYIGSKISLISKAEIRYEGVLYTIDTENSTVALAKVKSFGTEDRPTDRPIPPRDD
VFEYIIFRGSDIKDLTVCEPPKPTCNLPQDPAIVQSSLASTAGPTAPSFQSYSPFSRAPY
SQFTSTPLVPQAFGAAVTAGRSSPSLEPTRKTPTLEHAVQTATVAQPAAATSAASQKPAV
SRPILLTQKSAEIQELKASEVQKVPRPESDSNRPDNKDPNKRHSGGGGAPPMRRGRGSGG
GGGGQRGRGRFNGRRDGPMKFEKDFDFESANAQFNKEEIDREFQSKLKIKDEKSEKTLNG
EEKTDSGVETQNSEGNADEEDPLGPNCYYDKSKSFFDNISCDDTRKEKTAAGAFGRERRQ
TWAEERRMNAETFGIPLRRGRGGFRGRGGGMGYRGGRGRAASRGSFMPSRGGGAGFGGGA
GFRGGFRGGRGGREFSDFEYRKENKVAA
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagcggagggacgccttatatcggcagcaagatcagcctgatctcaaaggccgagatc
cgatatgagggagttttatacaccatcgacactgagaacagcactgtagctctggcgaaa
gtcaagtcttttggcactgaggatcgtcccacagacaggcctatcccacctcgagatgat
gtctttgagtacatcatatttaggggaagtgacatcaaggacttgacagtgtgcgagccc
cccaaacccacctgcaaccttcctcaggatcctgcaatcgtgcagtcctctttggcatcc
accgccggccccacagcaccttctttccagtcgtacagtcccttcagtcgcgccccgtac
agccagttcacctccactccgctggtaccacaggcattcggagctgcagtcaccgccggt
cgttccagcccatctctagagcccacgaggaagaccccgaccctggagcatgcagtccag
acggctacggtcgctcaacctgcggctgccaccagtgcagcgagccagaagcctgcagtc
agccgacccatccttctcacccagaaatctgctgaaatccaggagctaaaagcatcggaa
gttcagaaggttcctcggccagaatcggactcaaacaggcctgataacaaagacccaaac
aaacggcactctggaggaggtggtgctcctccaatgagaagggggcggggcagtggtggt
ggaggtggtggtcagcgtgggcggggcaggtttaatggccgtagagatggaccaatgaaa
tttgagaaggattttgattttgaaagtgccaatgcccagttcaacaaggaagagattgac
cgcgagttccaaagcaaactgaagattaaagatgagaagtcagagaagaccctgaatgga
gaggagaagactgattcaggtgtggagacccaaaacagtgaaggaaacgcagatgaagag
gatccactgggacccaactgttattatgacaaatcaaagtcgttcttcgacaacatctcc
tgtgacgacaccagaaaggagaaaacagcagcaggtgcttttggaagggaacggaggcag
acctgggcggaggagaggaggatgaatgcagaaacgtttggtattccactgcgtcgtggt
cgtggtggtttccgtggccgaggcggtgggatgggttatcgcggtggacgcgggcgcgca
gccagcagaggctccttcatgccatcccgtgggggcggagctggatttgggggcggagcc
ggattcaggggcggattcagaggtggcagaggaggccgagagttctctgactttgagtac
aggaaggagaacaaagtggcggcgtag

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