Danio rerio (zebrafish): 406827
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Entry
406827 CDS
T01004
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
406827 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
406827 (nedd1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
406827 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
406827 (nedd1)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
406827 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
PEP5_VPS11_N
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Vps41
PROPPIN
Beta-prop_VPS8
SdiA-regulated
Frtz
Beta-prop_DCAF12
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
406827
NCBI-ProteinID:
NP_998671
ZFIN:
ZDB-GENE-040426-2906
Ensembl:
ENSDARG00000013472
UniProt:
Q6PEI2
LinkDB
All DBs
Position
25:19541021..19556974
Genome browser
AA seq
676 aa
AA seq
DB search
MEDVTRLVSSGDCLKIWDSSSMTVVEQFNPHSATHPVAQVCWSSSNQYVVSASSIGDKLV
VSSLKSSPVPVMELGEGKKQTRVSLNSTSQFLVSGGLDNTVNIWDLKTKRLHRTLKDHKE
EVTCVSFNGGDSYIASGSTSGDIILHSITTNLSSKPFGHGPNVPIHDLRYSLVKRSLLGT
VSDSGSVALWDANTQKELHLFEGAHKAPCSGLAFSPANDLLFVTVGLDKKIVCYDTSSKI
VFRNKQVESPLTAIDFTPDGAGLVVGSTQGRIYLYDLRNLSAPVKINTAHKTSVTCIRFQ
NSTSKLKSTKSSSKSSQSNKRISVKLGSSQQTGPSTPTSTVTPIVSGSEFPGDGQAQVPG
PSAEVFSREAEGQLSQDQMPNVEKFSSIGRNSLNLDIFSPLNDGFKSHGFADTSRNGGSI
DVFSREAEGQQTADRFRVGRNSLDIFSPVRDDYKGHRLSDVSSGKKDFEYLPHFPGGSSQ
RKTPLGTPGSRCYSPSVVQTPPIKEEESTTTPPQQTDVQNGTKVEKSNGVRQEYDAITTP
PAAQSTRIQSVQPQFNTPEPSQRRDLSTQLTYDSPISRAPAPAPPAAAAAPAAAVESAPL
TSVQMNFVRNMIHEALEDFRDTCHRDIINLQVEMVRQFYIQLNEIHGLIEKYSVNDSLVE
EIERLKEENKRLRANY
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtcacacggctggtgtcgtccggtgactgtctgaagatctgggactcgagc
tcgatgacagtggtggagcagtttaatcctcacagtgccacacatccggtggctcaagtg
tgctggagcagcagcaatcagtatgtggtcagtgccagcagtataggagacaaactggtt
gtgtccagtctcaagtcctctcctgttccagtcatggagctcggtgaagggaaaaaacaa
acccgtgtgagtctgaactccacatcacagtttctagtcagtggtggactggataacact
gttaatatctgggacctcaagacaaaacgactgcaccgaacccttaaggatcacaaggag
gaggtgacgtgcgtgtcttttaatggaggagacagctacatcgcatcaggctccactagc
ggagacatcatcctccacagcatcacaaccaacctgtccagcaaacctttcggccacggg
ccaaatgtgcctattcatgatctgaggtactctctggtgaagcgctctctgctgggcacg
gtgtctgacagtggatctgtggccctttgggatgccaacactcagaaggagctgcactta
tttgaaggggcgcacaaagccccctgttcaggactggctttctccccagccaacgattta
ctcttcgttactgtaggcctggacaagaagatcgtctgctatgacacctcaagcaaaata
gtgtttcgtaataaacaggtggagtctccactcacagctattgattttactcctgatgga
gctggactggtcgtgggctcaacgcagggccgaatctacctgtatgacctgagaaacctc
agcgcaccggtcaaaattaacacagctcacaagacctcagtgacatgcattcgcttccag
aactccacctccaagttaaagtccaccaaatcatccagcaagtcttctcaatcaaataaa
aggatctcagtcaagctgggcagcagtcagcagacgggaccctccaccccaacatctact
gtcacacccattgtttccggatctgagtttcctggagatggtcaagcccaagtcccaggt
ccatctgctgaggtgttttctcgagaggcagagggtcagctcagtcaagatcagatgccc
aatgttgagaaattcagcagcatcggacgaaatagtttaaacctggacattttctcccct
ctaaatgatggttttaaatcacatggctttgctgatacttcaagaaatggcggcagtata
gatgttttctcaagggaagcagaaggacagcagaccgctgaccgcttcagagtcggcaga
aacagcctggacatcttttcacctgtacgagacgattacaaagggcacagactgagtgat
gtatcaagtggaaagaaagactttgaatatctacctcatttccctggaggctcatcccag
aggaagactccgttgggcactcctggcagccgctgctacagtccgtctgtggtgcagact
ccaccaatcaaagaagaggagtccaccactacccctccacagcagactgatgtccagaac
ggcaccaaggtggagaagagtaacggtgtacggcaggagtatgatgccatcaccacaccc
cctgcagctcagagcacgcgaattcagtccgttcagcctcagttcaacacaccagagccc
agtcagaggagagatctttccacacagctcacatatgattcccccatcagcagagctcct
gcacctgctcctcctgctgctgctgctgctccagccgcagcagtggagtctgctccactc
acttctgtacagatgaactttgtccgtaacatgattcatgaggcactggaggacttcaga
gacacgtgtcatcgagacatcatcaatctacaggtggagatggttcgccagttctacatc
cagttgaatgaaatccacggtctgattgagaaatactccgtgaacgactcgctcgtcgaa
gagatcgaaagactgaaagaggaaaacaaaagactacgagccaactattag
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