KEGG T01004: 407684

Danio rerio (zebrafish): 407684

Entry

407684            CDS       T01004

Symbol

vps25

Name

(RefSeq) vacuolar protein-sorting-associated protein 25

K12189

ESCRT-II complex subunit VPS25

Organism

dre Danio rerio (zebrafish)

Pathway

dre04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:dre00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    407684 (vps25)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    407684 (vps25)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    407684 (vps25)
Membrane trafficking [BR:dre04131]
Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    407684 (vps25)
Exosome [BR:dre04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   407684 (vps25)
  Exosomal proteins of colorectal cancer cells
   407684 (vps25)

SSDB

Motif

Pfam:

ESCRT-II DUF2555

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

ZFIN:

Ensembl:

UniProt:

LinkDB

Position

12:complement(3715686..3721989)

AA seq 174 aa
MSFEWPWQYNFPPFFTLQPNVDTRQKQLAAWCSLVLSYCRHRKLYTLDVLEAQESPVFNN
KKIERKLSVEAIQVVFEELRKKGNLEWLDKNKSRCLIMWRRPEEWGKLIYQWVSKNGMVN
SVFTLYELANGDDTEKEEFHGLEDWMLLRSLQALQTDGKAEIITVDDGKGVKFF

NT seq 525 nt +upstreamnt +downstreamnt
atgagttttgagtggccctggcagtataactttcctccattctttacattgcagccaaat
gttgacacaagacagaagcagctggcggcctggtgttcgctggttttgtcctactgtcga
caccgcaaactctacaccctggacgtgctcgaagcacaggagagccccgtattcaacaac
aagaaaatcgagagaaaactttcagtggaagccatacaagtagtttttgaagagttgaga
aaaaaaggaaatctggaatggttggataagaataaatcacgatgtcttatcatgtggagg
agacccgaggagtggggcaagctcatctatcagtgggtttccaagaacgggatggtcaac
tctgtgtttacactttatgaactcgctaatggagacgacacggaaaaagaagagtttcac
gggctagaggattggatgttgctgcgttcactacaggccctgcagactgacgggaaggca
gaaatcatcactgtggatgacggaaaaggagtcaaattcttttga

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