Danio rerio (zebrafish): 407696
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Entry
407696 CDS
T01004
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
407696 (ddx52)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
407696 (ddx52)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
Helicases
407696 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
407696
NCBI-ProteinID:
NP_001037780
ZFIN:
ZDB-GENE-060623-1
Ensembl:
ENSDARG00000100505
UniProt:
A0A0R4IJV5
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All DBs
Position
21:38855551..38869404
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AA seq
608 aa
AA seq
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MDAFDLFRKLGSGAKFDLKRFAKDAERFKVGKSQSKDSSDQLSGIRYFGRETQEDTSLDS
RPNEDDAEEGEASDEEQKQATESVKAARKKKKGAKRKSEDAEPETREGEGIQWMSLQNKT
KEAKQESKDKPSLKRLKQLHNEKVNRIRHQNRINVHGTDIPDPVTTFEELQKEYDLDPRI
IHNIQAAGFHTPTPIQMQAVPLMMHKREILACAPTGSGKTMAFCLPLLAHLRQPLNKGFR
ALIISPTRELATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRL
IYLLNQDTPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNVRRVLFSATF
ATDVERWCKLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVL
VFVQSIDRARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGI
DFKGINLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIATVIKKAGC
PVPDYMIGFKKIKSKLKHQLVTKPPRRAAIRTTPRMLFDRKLGKGKRKKRKATAKEAKGE
APEVISNC
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttgtttagaaagcttgggtctggagcaaagtttgatttaaaaagg
tttgcaaaagatgcagagcgatttaaggtaggaaaatctcagagcaaggacagctcagat
cagctgtccggaattagatattttggcagagaaacacaagaggacacatctctggattcc
agaccaaatgaagatgatgctgaagaaggagaagcaagtgatgaggagcagaaacaggct
acagagtcagtgaaagccgctcgaaagaaaaagaaaggagccaagagaaaatctgaagat
gcagaacctgagacaagagagggagaagggatccaatggatgtctttgcaaaacaagacg
aaagaggcgaagcaagagtcgaaagacaagccttctttaaaaaggttaaagcagcttcat
aatgagaaggtgaatcgaatacggcatcagaaccgaattaatgtgcacgggacggacatc
ccagatcccgttaccacttttgaggaactgcagaaggagtatgacctggacccacgaatc
atacacaacatccaggctgcgggtttccataccccaacacccattcagatgcaggccgtc
cctctcatgatgcataaaagagagatcctggcgtgtgctcctacaggctccgggaagacc
atggccttctgtctgccgctgcttgcccatcttcgtcagcccctcaataaaggtttcaga
gccctcatcatctcccccaccagagagctcgccacacagacccacagagagctgcttaag
ctgtcagaaggagtgggtttcagagttcacatgatcaataaaggagttgaagctgtgaaa
aaatatgggcccaagtctgcaaagaaatttgatatactggtgacgactcctaacagattg
atatatttacttaatcaagacactcctgctatcaacttaagtagtgtggagtggctggtg
gtggatgagtctgataagctgtttgaggacggtaagactggtttcagagagcagcttgcc
actatcttcctggcctgctcttctcccaatgtccgcagggttctcttcagtgccacgttt
gcaacagatgtcgagcgatggtgcaaactgaacctggacaaccttgtcagtgtcagcatt
ggagccaggaactctgcagctgaaactgtggagcagcagctgctgtttgtgggttcagaa
aatggaaaaatcctcgccatgagaaacctcataaagcaggggtttctaccgcccgtgttg
gtgtttgttcagtcgattgatcgagccagagagctgtaccatgagctggtgtatgagggc
ataaatgtggatgtgatccatgcagatcgtacacaacaacagagggataatgtggtgagc
agtttccgctcaggaaagatctgggtgttgatctgcactgctcttctggctcgaggcatc
gacttcaagggcatcaatctggttatcaactatgactttcctacttcagctgtggagtac
atccatcgcatcggccgaacaggaagagcaggacacaaagggaaggccgtaactttcttc
actgaggacgacaaacctctcctgcgcagcattgctacggtcataaagaaggctggatgt
cctgttcccgactacatgattgggttcaagaaaattaaaagcaaattgaaacaccagctt
gtgacaaaaccacccagacgggccgctattcgcacgactccacgcatgctttttgacagg
aagcttggcaagggaaaaaggaaaaagagaaaagccactgcaaaagaagcaaaaggcgaa
gcaccagaagtcatttctaactgctga
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