Danio rerio (zebrafish): 407713
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Entry
407713 CDS
T01004
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
407713 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
407713 (tbpl2)
03021 Transcription machinery [BR:
dre03021
]
407713 (tbpl2)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
407713 (tbpl2)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
407713 (tbpl2)
RNA polymerase III system
TFIIIB
407713 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
407713 (tbpl2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
407713
NCBI-ProteinID:
XP_073783272
ZFIN:
ZDB-GENE-040520-3
Ensembl:
ENSDARG00000097302
UniProt:
A0A8M2BH15
LinkDB
All DBs
Position
17:11931689..11941193
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AA seq
313 aa
AA seq
DB search
MNMDEEASLESYFDQTIAGSSDYIFEGDLGLQGSTSQLQDSSFLSSLASQEKDLTEDLDL
SFLPDELSTQDEPSQVEKESKNEDSGIYTDCPQKESTQADIDTSNSAQNTSQFNLPMTPM
TPMTPMTPVAESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIRE
PRTTALIFSSGKMVCTGAKSSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVC
FPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAF
ENIYPILKGFRKQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggatgaggaggcatccctcgaaagttactttgaccagactattgctggctca
tctgattatatctttgaaggggatctgggtctgcagggttcgacttcgcagctccaggat
tcctcttttctgtcctctttagcgtctcaggagaaagatctgacagaggacttggacctg
agcttcttacctgatgaactgagcactcaagatgagccgtcacaagttgagaaagaaagc
aagaatgaagacagcggcatctacaccgactgcccgcagaaagagtccacacaggcagac
attgacaccagtaattcggcccaaaatacctcacagttcaacctcccgatgactcccatg
accccgatgactcccatgaccccggtggcagagagttcaggcatcatcccgcaattacag
aatattgtgtcaactgtgaatcttgcttgccctctggatctcaaatccattgcacttcaa
gctcgaaatgctgaatacaacccaaagcgttttgctgctgttataatgaggatccgtgaa
ccaagaactacggctctcattttcagctctggaaaaatggtctgcactggagccaagagt
agtgaagagcaatctcgcctcgctgcacggaaatatgctcgggtggtacagaaacttggt
tttcctgccaaattcctcgacttcaaaattcaaaatatggttgggagttgtgacgtctgc
tttcctatacgcttggaaggcctggtcctcactcatcagcagttcagcagctacgagccc
gagttgtttccaggtttgatatatcgcatggtgaaaccacgtattgtgctgctgattttt
gtgtctggaaaagttgtgctcacaggtgcaaaagagcggtccgagatctatgaagccttt
gaaaatatttaccccatcctgaaaggatttaggaagcaatag
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integrated database retrieval system
