Danio rerio (zebrafish): 407729
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Entry
407729 CDS
T01004
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
407729 (caprin2)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
407729 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
407729
NCBI-ProteinID:
NP_001013291
ZFIN:
ZDB-GENE-040812-2
Ensembl:
ENSDARG00000020749
UniProt:
Q5RJ80
B7ZVU9
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:complement(17203019..17217036)
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AA seq
914 aa
AA seq
DB search
MRKTETMVQLSPSRTLETLTPSELTVEKDDGQGSPKPESPRMLSALQLALSSTTVYCGYE
KYIEDGLICLKHKIRNIEKKKLKLERYSDKLKKGEKLNEDQLEAVGKYDEVVHNLKFAKE
LQKTIGSLTQDLLKAQRKAVRQEKQMKTDEEKSRLSLMLQVQYVLHSLQREDVRKNFCNT
RQYSCYMSTQDMEGLMDLASLVGCKRDYSISLEDQMRRAAIVYWELLEGNEKPVAGSTYK
HMKEKLLRLVDSGFFDNIPLPKSDSQEKTETIKPDSQSRPSGLTTLVKLSSNEVPSKEFL
NRRYMPETDERRRGETASPRNWKEDFLAMKEREPPDSWEMEELADPPASSQSPIQKPWKG
AAGLIPKTVDIVKRSTTDPKEKRQRKKAEQDSKSMPVAVEVFSSPSPLPKDPVQRRQQLE
TLMDQISGSFSFMQESLLDGESSPVNTQTKRCRPSPGSSTPIVQRELTKSPSDILPSSQR
STPLRILLSGEGKGCLSNGDRSINGSDLELHSEDKPRKQAEGFNSPPLYRRGSSISVSLE
NQSTVQAGRQMLCNGVSSSGSAQTFSTPPSRRSISAENPFHNIHSVFNVIGESSGMKADE
SGFSESIHRSFTSAKTSSVTTASTQTPPELNPPEEDLQIEGQYPLECAVSAGGPVFSSSH
SRVGQSCYSRGAVRGGYDAYRVNVRSPGGSFMSQTHREPASALYMARENGYQQNFKRGAG
TATQRSSAGWSDSSQVSSPDRDGAYPLDSGLSDTLSIPAMEVPMNPQGPHTLMPVHVYPL
TQLRVAFSAARTANFAPGTLDQPIAFDLLHTNLGDMFDTGSGRFTCPATGAYVFIFHILK
LAISVPLYINLMRNEEVMVSAYANDGAPDHETASNHAVLQLFQGDQVWLRLHRGAIYGSS
WKYSTFSGFLLYQD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagactgaaaccatggttcagctatcaccatctcggacattagagacgttgacg
ccctcggaactcactgtggagaaggatgatggccagggcagcccaaaacctgaatcccct
cgaatgctttccgccctccagctagccctgagctctacaaccgtctactgtggctatgag
aagtacattgaggacggcctcatttgcctcaagcacaagattcgtaacattgagaaaaag
aagctcaaactggaaagatacagtgataagctgaagaagggggaaaagctgaatgaagac
caactggaagctgtgggcaagtacgatgaggtggtccataatctgaagtttgccaaagag
ctccagaagaccatcggctccctcactcaagatttgctgaaggctcagcgtaaagccgtt
cgccaagagaagcaaatgaagactgatgaggagaagagccgtttgagtctaatgctccag
gtgcagtacgtcctccatagtctgcagagagaggacgtccggaagaacttctgcaacacc
agacaatattcctgctacatgtccactcaagacatggagggtttgatggatttggcatca
ctggtgggatgtaaaagggattacagcattagtttggaggatcagatgcgacgggctgct
attgtttactgggagctgctggaagggaatgaaaaaccggttgctggctcgacatacaag
cacatgaaggagaagcttcttcgcctagtggattctggctttttcgataacatcccgctt
cctaaatctgacagtcaagagaagaccgaaaccataaagcctgattctcaatccagaccc
agtggcctcaccacgctggtaaagctgagctcaaatgaagtgccttccaaagagtttctt
aacagacgatacatgcctgaaactgatgagcgcagacgaggtgaaaccgcatcgcctcgc
aactggaaggaagactttttggccatgaaggagagggagccaccggactcctgggaaatg
gaggagcttgctgatcctcctgcgtcctcccagtcccccatacagaagccatggaaagga
gcagcgggtttgattcctaaaactgtagacattgtgaagagatccacgactgaccctaaa
gagaaacgtcaaagaaagaaggctgagcaagactccaaatctatgcccgttgcagtggaa
gtcttcagttctccatctccgttaccaaaagatcccgttcagcgccggcagcagctggag
acactgatggaccagatctctggctccttcagtttcatgcaggagtctcttttggatgga
gaatcttcacctgtcaacactcaaacaaaaagatgccgtccatctccaggctcctccact
ccaatcgtacagagagaattgaccaaaagcccttcagatattctgccttcatcgcagcgg
agcactcctttgcggattctgctgtctggagagggtaaaggctgtctgtccaatggagat
cgctccataaatggctctgatctggagctgcactctgaagataagccacggaagcaggct
gagggcttcaactcacctccactgtaccgcagaggatcctccatttcagtttctctagaa
aaccaaagcactgtacaggcaggaaggcagatgttatgcaatggagtatcgagctctggt
tctgcacagacattttcaaccccacccagtcgcagatccatcagcgcagaaaaccccttc
cacaacattcactctgtgtttaatgtgatcggcgagagctcagggatgaaggcagatgag
agcggtttctcggagtccatacatcgcagtttcacgtcagccaaaacctccagtgtaacc
actgccagcactcagactccacctgaacttaacccacccgaggaagacctgcagatcgaa
ggccagtatcctctggagtgtgcagtcagtgctggtggtcccgtgttctccagctcccat
tctcgtgtgggtcagtcgtgttactctcgcggggcagtcagaggtggttatgatgcctac
agagtgaatgtacgttccccaggaggaagcttcatgtcccagacacacagagagcctgcg
tctgcactttacatggccagagaaaacggctatcagcaaaacttcaagagaggagcaggc
acagcaactcagaggagcagcgccggctggagcgactcttctcaagtgagcagtccggat
cgagatggggcgtatcctctggattcaggacttagtgacaccctgtctatcccggccatg
gaggtgcccatgaatccacaaggcccgcacaccctgatgcctgtccatgtgtacccactc
acccagctccgtgtggcattctctgctgctcgcaccgccaactttgcgccgggcacttta
gaccagcccatcgcctttgatctgctccacaccaacctgggtgacatgttcgacactggc
tctggtcgcttcacctgcccagccaccggtgcctacgtcttcatcttccacatcctgaag
ctggccatcagcgtgccgctctacatcaacctcatgcgcaacgaagaggtgatggtgtcc
gcgtatgccaacgacggtgccccagatcacgaaacggccagtaatcatgctgtcctgcag
ctgtttcaaggcgatcaggtgtggctcaggctgcaccgtggcgccatctatggcagcagc
tggaagtatagcaccttctctggattcctgctgtaccaggattga
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