Danio rerio (zebrafish): 407987
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Entry
407987 CDS
T01004
Symbol
arhgef18a
Name
(RefSeq) rho guanine nucleotide exchange factor 18a isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
407987 (arhgef18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
407987 (arhgef18a)
Membrane trafficking [BR:
dre04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
407987 (arhgef18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
407987
NCBI-ProteinID:
XP_005171341
ZFIN:
ZDB-GENE-040516-14
Ensembl:
ENSDARG00000011157
UniProt:
A0A8M3AXD6
LinkDB
All DBs
Position
2:complement(40531008..40557978)
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AA seq
940 aa
AA seq
DB search
MDDIDYYRSKPLAEESNFQTTNYDAISIDECHYNVLRDDLESDARDFEAPTWSLAVDPQY
LKNFSKDAVKRQDVIHELIQTEINHVRTLKIVLNVYIRELRNTLQMDETRLERLFPQVEN
LLEVHQFFLDNLKLRRLDSMEPGSSQNYCIHNLGDILITQFSGEIGSRLRYLYGMFCSRH
TDAVNFYKDLMQNNKKFQNLIRKICQLSIVRRLGIPEIILLITQRITKYPVLFERVIKYT
EDESEEQMDLIKGLDFLKDTIAQVNAHVDEAEKEARLRELSSKLEPKSQVKMTSGRVFRR
EDMLQGKRKLLHEGMLNWRVTNNKGKGDKHTDVIVLLLSDVLLLLLEKDSRLTFASLDGK
PAVISLLKLIVREAAHNEKAMFLISASLDTPEMYEFHTSSAEERNTWTNKIWKAVECCPD
VKEEEPEELSKKIWEFQRKLCVHDASIEQHLTEKLKLFSSIAASVTGVSDTSTSERHPLR
GNAAEPLQGERLLTGALKDVENLQNLLVMCEQGPTPFTSRATDLVLKKPHAVTGLENNTH
MLPENGFESSMESMGDRIQVANTDLDPQLRELHLSENQELSADENLSVHFPKAEFYSTVS
QLSRKLYSLQSVVQQLESHIKVQHATIEELKSRPRGNSLLEQEKHRNLHKQNEELANFQR
LQNQRLQEQRQWEQERERQMLQAEAREKELREREMACSRQEEMLAGEKQELARCREEYQQ
DLERLRESMRSVEKEKEKLELQKKYKKNENVPVVYPLENEQIQIPPPYPILNIVSPGFTE
RAPLVPPRRESITGSLVKPEVPIHLISTTNQTLKAGSVQQKIPTKLAAQPKGKEKHSKHR
NSHQRTNSAAGIEVSHVVPIKVAGREGGSLKAIRSSSPHHLHPDLFTHPDKLSSSVSSHS
GNSSRKHNHSHNSHTSSTHSTHSGHRKTKDSPNAEDIFFF
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggatgatattgattattacagaagcaagcctctggcagaggaatcaaatttccagacc
acaaactatgacgccatcagtattgacgaatgccattataatgtgctgcgtgacgatctg
gagtccgatgctcgggactttgaggctcccacctggagtttagctgttgacccacaatat
ttgaaaaacttttccaaagatgccgtcaaaagacaggatgtaatacacgagctgattcag
acagaaatcaaccatgtgcggacgctaaagatagttttgaatgtgtacattcgggagctg
cgtaacaccctacaaatggatgagacacgactggaaaggctgtttccacaggtggaaaac
ctgctggaggtgcaccagtttttccttgacaatcttaaactgcgaagacttgactctatg
gagcctggaagctcccagaattactgcatccacaatcttggggacatccttatcacacag
ttctctggtgaaataggaagcagactgcggtacctctatggcatgttctgcagtcgtcac
accgatgcggtcaacttctacaaagacttgatgcaaaacaacaagaagttccaaaatttg
atacgaaaaatatgtcagctgtccattgtacggcgattaggaataccagagattattctc
cttataactcagcgcatcactaagtacccggttctgtttgaacgtgtcattaagtacact
gaagatgagtcagaagaacaaatggacctgataaaagggctggactttctgaaggacacc
atagcacaagtgaatgctcatgtggacgaggctgagaaagaggcacggctgagagaactt
agcagtaaactggagcccaagtcccaggtgaagatgaccagtgggagggtgtttcgtcga
gaggacatgctgcagggaaagaggaagctgcttcatgagggcatgctcaactggagggtc
acgaacaacaaaggcaaaggtgataagcatacagatgttatcgtcttgctgttgtctgat
gttttgctgcttttactggagaaagattccaggcttacctttgcctctctggacggtaag
cctgctgtgatctctctgctgaagctcattgtacgtgaagcagctcacaacgagaaggcc
atgtttcttatctcagcttctttggacactcctgagatgtacgagtttcacacctcctct
gcagaagagcgcaacacctggacaaacaagatttggaaggcagtggagtgctgtccagac
gtaaaggaagaagagccagaagaactctctaagaagatctgggaatttcaaagaaagctg
tgtgtgcacgatgcctcgatagagcagcacctgacagagaagctgaagttattctccagc
atagcagcttcagtgactggtgtttcagacacctcgacgagtgagcgccatccgctacgt
gggaatgcagcagagcccctgcagggagaacgactactcaccggagccctgaaagatgtg
gagaatctacagaacttgctggtgatgtgtgagcagggcccaactcctttcactagtagg
gcaacggatctggtcctgaagaagccccatgctgttacaggcttggagaacaatactcac
atgttacctgaaaatggttttgagagttcaatggaaagcatgggagacagaattcaggtg
gccaacacagacttagaccctcagctaagagaacttcatttaagtgagaaccaggagctg
tcggcagatgagaatttgtcagttcactttcctaaagcagagttttattccactgtatct
cagttgtctcggaaactctacagccttcagtctgtggtccagcagctagaaagccacatc
aaggttcagcatgccactattgaggagctgaagtcccgaccacggggaaactctctcttg
gaacaggaaaagcaccggaacctgcacaagcagaatgaggagctggccaacttccagcgg
ctccagaaccagcgcctacaggagcagagacagtgggagcaggagagagagaggcagatg
ctgcaggctgaggccagggagaaagagctgagggagagagagatggcatgcagcagacag
gaggaaatgctggctggggaaaaacaagaactggcccggtgtagagaagaataccagcaa
gatctggagaggctgcgagagtccatgcgctctgtggagaaggaaaaagaaaaactagag
ctgcagaaaaaatataagaaaaatgagaatgtgcctgtagtctatccgcttgaaaatgaa
cagatacagataccgccaccttaccctatattgaacatagtttctccaggcttcacagag
agggctcctctagttcccccacgcagagagagcatcactggttcacttgttaaaccagaa
gtgcccatccacctcattagcaccaccaaccaaaccctcaaagctggctctgtccaacag
aagatacccaccaaacttgctgctcaacctaaaggcaaagagaagcacagcaaacacagg
aactcccaccaacgcaccaacagcgcagctggcatagaggtgtctcatgtcgttcccatc
aaagttgcaggaagggaaggaggcagtttaaaagccatcaggtccagcagtcctcatcat
ctccatccagatttatttacccatccagataagttgtccagctccgtttcttctcattcg
ggaaactccagccggaagcacaaccacagtcataactctcacacttctagcacacacagc
acccattcaggacatcgtaaaaccaaagacagcccaaatgcagaagacatttttttcttt
taa
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