Danio rerio (zebrafish): 414273
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Entry
414273 CDS
T01004
Symbol
rgmB
Name
(RefSeq) repulsive guidance molecule B precursor
KO
K06847
RGM domain family member B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
414273 (rgmB)
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Gene cluster
GFIT
Motif
Pfam:
RGM_C
RGM_N
DUF386
Motif
Other DBs
NCBI-GeneID:
414273
NCBI-ProteinID:
NP_001001727
ZFIN:
ZDB-GENE-040527-2
Ensembl:
ENSDARG00000079323
UniProt:
Q6IYD1
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Position
5:complement(56368270..56389517)
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AA seq
436 aa
AA seq
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MGMGRAGSYYPGAERLISPVLHLLVLCTLSSLTPIGESQVQTPQCRIQKCTTDFVSLTSH
LNPSLDGFDTEFCKALRAYSACTQRTAKSCRGNLVFHSAMLGITDLMSQRNCSKDGPTSS
THPVIPIEPCNYHSRHHHHVSRFGTGVPEHPRLMYLFCGLFGDPHLRTFKDQFQTCKVEG
AWPLIDNNYLSVQVTNVPVVYGSSATATNKITIIFKPYQECTDQKVYQAVTDDLPAAFVD
GTISGGDSETRSIWILEKSPGRHVEIHAAYIGVTIIIRQQGRYLTLAVRMPEELAMAFDE
TQDLQLCMNGCPTSERIDQEGHLQLPVLGLQQAGFQQQQQPRVEAQRGVFTLESASRRCR
DQLEVKDIYFHSCVFDLLTTGDANFTTAAYNALKDMETLHPKKERWQIFPNSASRLSPFS
LLLTALLSSFLIAVLL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggggagagcaggatcttactaccccggggctgagcgcctcatctctccggta
ctacatctactagtgctgtgcaccctctcctccctcactcccataggtgagagtcaggtt
cagactcctcagtgccgcatccagaagtgcactaccgacttcgtttctctgacgtcccat
ctgaacccatcactggatggctttgatacggagttctgcaaggcgctgcgagcctattcg
gcctgtacgcagcgtactgccaagagctgcagggggaacctggtcttccactccgccatg
ctgggcatcactgaccttatgagccagaggaactgctccaaagacgggcccacgtcctcc
acccatcccgtcatccctatcgagccttgcaactatcacagccggcatcaccaccacgtg
tcgcggttcgggacgggggtgcccgaacaccctcgtctgatgtacctgttctgtggcctg
ttcggggaccctcatcttaggacttttaaagaccagtttcaaacatgtaaagttgaaggg
gcttggcctctcattgataacaactacctgtcagtgcaggtcactaatgttccagtggtt
tatggatccagtgccacagctaccaataagatcacaataatcttcaaaccataccaagaa
tgcacagaccagaaggtctaccaggccgtgacagacgaccttccagccgccttcgtagac
ggcaccatcagcggaggtgacagtgagacccgcagcatctggatcctggagaaatctccc
ggtcggcatgtagaaatccacgctgcgtacatcggggtcaccatcatcatacgccagcag
ggccgttacctgacactagctgtgcggatgcctgaggaactggccatggcctttgatgaa
acgcaggacctgcagctgtgcatgaacggctgccccacatcagagcgcattgaccaggag
ggacacctccagctgcccgtgcttggcctccagcaggctggctttcagcagcagcagcag
cccagggtggaagcccagagaggcgtcttcactcttgaaagtgcctccaggaggtgcagg
gaccaactggaggtgaaggacatctatttccactcctgtgtgtttgacctgctcactaca
ggagatgccaacttcaccactgccgcctacaatgccctgaaagacatggagacactgcat
cccaaaaaggagcgctggcagattttccccaactcggcttccaggctgagtcctttttca
ttgcttctcactgcactgctgagcagcttccttatcgctgtgcttttataa
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