Danio rerio (zebrafish): 414931
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Entry
414931 CDS
T01004
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
414931 (ift52)
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
414931 (ift52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF4350
OST48_N
DUF4159
Motif
Other DBs
NCBI-GeneID:
414931
NCBI-ProteinID:
XP_073771808
ZFIN:
ZDB-GENE-040614-3
Ensembl:
ENSDARG00000045025
LinkDB
All DBs
Position
11:1609781..1625036
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AA seq
435 aa
AA seq
DB search
MDKEQRNIVVFNASKRELFTSSSGYKSLQKKLRAQWKIQSIKEELTLEKLQGVKLWITAG
PREKFTAAELEVLKQYLDSGGALLVMLGEGGELKYDTNINFLLEEFGIMVNNDAVIRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGVIDEENTGNNSQALTFVYPYGATLNVMKPA
VAILSTGSVCFPLNRPVLAFHHSKNAGKLAVLGSCHMFSDQYLDKEENSRIMDVVFQWLT
TDSIHLNQIDAEDPEITDYMMLPDTGSLSERLRVCLQEGDENPRDFTSLFDMSLLKLHTN
TLPSVLDAYKQLNVKHEALQLITPQFETPLPPLQPAVFQPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGNLDKDKRDAKHILEHVFFQVVEFKKLN
EEHDVDTAEARFSMY
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagcaaagaaatatcgttgttttcaacgcatccaagagagagcttttcacc
agcagctcaggatacaagtccttacagaagaaactccgagctcagtggaagattcaaagc
attaaagaggagctgacgttggagaagctccagggagtgaagttgtggatcaccgcaggt
cctcgagagaagttcactgctgctgagttggaggttcttaagcagtatctggacagtggt
ggagctcttctggtgatgctcggagaaggaggagaactgaaatatgacaccaacatcaac
ttcctcctggaagaatttggtattatggttaacaatgatgcagtgatacggaatgtctat
tacaaatatttccatcctaaagaagcgcttgtgtccaacggtgttctcaacagggagatc
agccgtgctgctggtaaagtggtcacaggagtgattgatgaagaaaacacaggcaataat
tcacaggcacttacgttcgtctacccctatggggccacgctaaatgtgatgaagcctgca
gtggccattctgtccactggatctgtgtgttttccactcaacaggcctgttctggccttc
caccactcaaagaacgctggcaaactggcagtcctgggctcctgccacatgttcagtgac
cagtacctggacaaggaggagaacagcaggataatggatgttgttttccagtggcttaca
accgatagcattcatctgaaccagatcgatgcagaggacccagagatcactgactacatg
atgctgccggacaccgggagtctgtctgaacgcctgagagtgtgtctgcaggagggagac
gagaacccgcgagatttcacatctctcttcgacatgtccttgctaaagctgcacacaaac
actcttccttctgtcctggatgcttacaagcagctgaatgttaaacatgaggctctccag
ctgatcacaccacagtttgaaacccctctgcctcctctgcagcctgccgtttttcagccg
gcctttagagaccttcctccaccaatgctggacctgtttgacctggacgagaccttctcc
tctgagaaagtccgacttgctcagctctccaataaatgtaccgatgacgatcttgagttt
tacgttcgtaaatgtggagacatcttaggagtgacggggaatttggacaaagacaaacga
gatgccaagcacatacttgagcacgtcttcttccaagtggtggagttcaagaaactcaat
gaagagcacgatgtggacacagcagaagcgaggttcagcatgtactga
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