Danio rerio (zebrafish): 432387
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Entry
432387 CDS
T01004
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
432387 (pkd2)
04040 Ion channels [BR:
dre04040
]
432387 (pkd2)
Cilium and associated proteins [BR:
dre03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
432387 (pkd2)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
432387 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CNNM
Motif
Other DBs
NCBI-GeneID:
432387
NCBI-ProteinID:
XP_073792981
ZFIN:
ZDB-GENE-040827-4
Ensembl:
ENSDARG00000014098
LinkDB
All DBs
Position
1:53845908..53874968
Genome browser
AA seq
928 aa
AA seq
DB search
MTVKSLKENGKGIRVRRLVTHKYTMSSSRVRPQAPQSPAASASASPPPHEGIEMEKMHHE
EVGLGVPDETPSSPPTSSSRQAWSRDNPGFEPEEGMMEADWPPESQGRRSVSTTSSSSSG
GVPGNFSGISARINRGLYPTPPAQEHRSCGKRILEKMRVLWDTRLLGESNSNREMYLKTV
LREMITYILFLLTLCIITYGMVSTNMYYYTKVMSQLFLDTPLSSGEPTNFKSLSTMEDFW
KFTEGPFLNGMYWELWYNNKSLPENQSLIYYENLLLGVPRLRQLRVRNESCSVHEDLRDE
VYDCYNVYSPANEDKAPFGPKNGTAWRFKDESSLGESSYWGQVSTYGGGGYYQDLSRTRE
KSANQLQELKNNLWLDRGTRAVFLDFSIYNGNVNLFCIVRLLVEFPATGGAVPSWQFQTV
RLLRYVSSWDYFVGMCEVSFCLFVLYYLVEEALEIRLHRLRYFKSLWNCLDVLIVALSVP
AIIMNICRTSAVSHRLHFLLENHSTYPNFEPLARLQVHFNNLAAIIVFLSWVKLFKFINF
NKTMNQLSTTMSRCAKDLMGFAIMFFIVFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRI
ILGDFDFSEIEEADSVLGPIYFTTFVFFIFMILLNMFLAIINDTYSEVKADMAQQRSEME
ITDLIKKSYNRAMVKLKLKKSSINDIPDSLQQAAGKLSFDELRQDLRGKGHSDAEIEAIF
AKYDLDGDQELTEHEHQQMRDDLEKEREDLDLEHSSLPRPASGRSFSRSQDDSEEDDDED
SGHSSRRRGSSSGGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKMKRRD
VLGRILDGVMEDERMGRDPELQREQMDRLVRDELERWESDDTMSQVSHHHHQATPIISSA
QLRPRSSRPPSSLSNEGPDAAASGPAHL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaagtcattaaaggaaaacggtaaagggataagagttagaagactggtgaca
cataaatacacgatgagctccagtcgcgttcgtcctcaagcgccgcagagcccggcggca
tctgcatccgcatctcctccaccgcatgaaggcatcgagatggaaaaaatgcatcatgaa
gaagtgggcctcggagtgcccgatgagaccccctcctctccgccaacctccagctccaga
caggcatggagccgggacaacccagggttcgagccggaggaggggatgatggaggcggac
tggcccccggagagtcagggccggaggtctgtgtccacgacgtccagcagcagcagcggc
ggcgtcccggggaacttctccggtatcagtgcgcggatcaacagaggactttacccgact
cctccagcacaagagcaccgcagctgtgggaagaggatactggagaaaatgagagtgttg
tgggatactcgtcttttgggtgagagcaacagtaacagagagatgtacttgaaaaccgtc
ctgcgagaaatgatcacctacatcctcttcctgctcaccctctgcataataacctatgga
atggtgagcaccaacatgtactactacaccaaagtcatgtctcaactctttttggatacg
ccactgtcaagtggagagccaaccaacttcaagagcctttcaaccatggaggacttctgg
aaattcacagaaggcccgtttcttaacggcatgtactgggagctctggtacaacaacaag
agtctcccagaaaaccagagtctgatctattacgagaacctcctgctgggcgtcccgcgt
ctccgacagctcagagtacgcaatgagtcttgttctgtccatgaggatctgcgagacgag
gtttacgactgctacaacgtctactctcctgccaatgaggacaaggcaccattcggcccc
aagaatggcactgcgtggaggttcaaggatgagagtagcctgggtgagagcagttactgg
ggacaagtgtccacttatggtggtggaggttattaccaggatctgtcccgcacacgggag
aaatcagccaatcagctgcaggagctcaaaaacaacctctggctggaccgcggcactaga
gcggtgttcttggacttctccatctacaacggcaatgttaacctcttctgtattgtgaga
ctgctagtagagtttccggccacagggggcgctgtgccttcttggcagttccagacggtg
cgtctgctccgctatgtctccagctgggactactttgttggcatgtgtgaagtgtccttc
tgcctcttcgtgctgtattacctggtggaggaagctctagagatccgcctgcatcggctg
cgctacttcaagagcctgtggaactgcttagatgttctcatagttgcattgagtgttccc
gccatcattatgaacatctgcagaacatcagcggtcagtcacagacttcactttctgctg
gagaaccacagcacgtatcccaactttgagccgctggctcggcttcaggtgcacttcaac
aacctggcagctatcatagtcttcctctcatgggtgaagctttttaagttcatcaacttc
aacaagaccatgaatcaactgtccaccaccatgtcccgctgtgccaaagacctgatgggc
ttcgcgatcatgtttttcatcgtgtttctggcttatgctcagctggcctatttagtgttt
ggaactcaagtcaacgacttcagcacctttcaggcctgcattttcacgcagttccggatc
atactgggtgatttcgacttctcagaaatcgaggaggccgacagcgtgttgggacccatt
tacttcaccacctttgtgttcttcatcttcatgattctgctgaacatgttcctggccatc
atcaatgacacttactctgaggtgaaagctgacatggcgcagcagaggtcggagatggag
atcacagacctcattaagaagagctataatagagccatggtgaagctgaagctgaagaag
agctctatcaatgatatcccggacagcttacagcaggcagcaggaaaactcagcttcgat
gagctccgccaagaccttagaggaaagggccattcggacgctgaaattgaagctattttt
gccaagtatgaccttgacggagatcaggagctgaccgaacatgagcaccagcagatgaga
gacgacctggagaaagagagagaggacttggatctggagcacagttcgctgccgaggcca
gccagtggacgtagcttctcccgtagccaagacgactcagaggaggatgatgacgaggac
agtggacacagctctcgacgccgcggcagcagctccgggggcgtgtcttacgaggagttc
caagtgcttgtgcgccgggtggaccgaatggagcactcaattggcagcatcgtctccaag
atcgatgccgttatcgtgaagttggaagccatggagagagccaagatgaagaggagagat
gtgcttggacggatcctggatggagtcatggaggacgagcggatgggtcgggatccagag
ctgcagcgagagcagatggacaggttggttagggacgagctggagcgctgggagtctgac
gacaccatgtcccaggtgagccaccatcatcatcaggccactcccatcatctcatcagct
cagctccgcccacgcagctcccgcccaccctcctcgctgtccaacgagggcccggatgct
gcagccagtggccccgcccacttgtga
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