Danio rerio (zebrafish): 436631
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Entry
436631 CDS
T01004
Symbol
trim55a
Name
(RefSeq) tripartite motif-containing protein 55A
KO
K10654
tripartite motif-containing protein 55
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
436631 (trim55a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
436631 (trim55a)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
436631 (trim55a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
436631
NCBI-ProteinID:
NP_001002358
ZFIN:
ZDB-GENE-040718-50
Ensembl:
ENSDARG00000029596
UniProt:
Q6DHS0
LinkDB
All DBs
Position
2:complement(45120558..45135094)
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AA seq
443 aa
AA seq
DB search
MSVTLDYCLSRSRDTMESLERQLICPICLEIFTKPVVILPCQHNLCRKCANDIFQASNPY
LPTRGGSSLGSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQESSSSKPEPQV
KEEVLMCEEHQDERINIYCVTCSVPTCSLCKVFGSHQTCEVAPLKSVYESQKTELSDGVG
LLVGNNDRIQGIISQLEETCRSVEENGRRQKSRVCEWFDRLYALLEERRGDLTLKITAEQ
QEKLDYISGLQRKYREHLDNSAKLVETGIQTMEESEMAIFLQNTKPLLQQIAESRNVSHL
EKVERGYENMDHFSANFQSERRAILSIDFIKDGDDNDEDEDDDEEITVNPEASSGAAPAP
VQQRQTPVPNPSPMAADSVQMSLKPSQSANTNPTENTPIVTPTPDSTHIPSADAQAQVTS
GPGQTSDDGQRHVFSFSWLNMPK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgactttggattactgcctcagtagatcgcgcgacaccatggaaagtttggag
aggcagctcatttgccccatttgccttgagatcttcaccaaaccggtggtcattttaccg
tgccagcacaacctctgccgcaaatgtgccaacgacatctttcaggcctcaaacccctac
ctacccacacggggaggctcttcactgggctccggcggccggttccgctgtccctcctgc
agacatgaagtagttctggacaggcacggggtctatggcctgcagaggaacctgctggtg
gagaatatcatagacatgtacaaacaggagtccagcagcagtaaacctgagccacaagtg
aaggaagaggtgctgatgtgcgaagagcatcaggacgagaggattaatatctactgcgtg
acgtgctctgttcctacttgttcgctatgcaaagtgttcgggagtcatcagacctgtgag
gtcgctccacttaaatctgtctatgagtcccagaaaacagagctgtccgatggcgttggc
ctgttagttggaaacaatgacagaattcagggaattatcagtcagctagaggaaacctgc
agatctgtggaggagaacggtcgcaggcagaagtctcgtgtttgcgagtggtttgatcgc
ctgtatgctcttctggaagaacgcagaggagatctaacgctgaagatcacagcagaacag
caggagaagctggattatatcagtggcctacagcgcaagtacagagagcatctggataac
tcagctaaactagtggagacaggaattcagacaatggaggaatctgaaatggctatcttc
ctgcagaacacgaagcctctgctacaacagattgcagaaagcaggaatgtgtctcactta
gagaaggttgagcgtggatatgaaaacatggatcatttctctgcaaacttccagtcggag
cgaagagcaatcctcagtatagactttatcaaggatggggacgacaatgatgaggatgag
gatgatgatgaagaaataaccgtaaatcctgagactcaggcatcttcaggagccgcacct
gccccagttcagcagagacaaacccctgtgccaaatccttcaccaatggcagctgactct
gtccaaatgtcatcaaagcccagccaatcagcaaacacaaatctgacagagaacacaccc
atggttacacccactccagactccactcacatcccttccgcagatgcacaagcacaggta
acatccggtcccggccagacatctgatgatggacaacgccacgttttctctttctcttgg
ttaaatatgccaaagtaa
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