Danio rerio (zebrafish): 436724
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Entry
436724 CDS
T01004
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
436724 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
436724 (ufd1l)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
436724 (ufd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
436724
NCBI-ProteinID:
NP_001002451
ZFIN:
ZDB-GENE-040718-150
Ensembl:
ENSDARG00000010051
UniProt:
Q6DRD5
LinkDB
All DBs
Position
8:4761271..4776395
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AA seq
308 aa
AA seq
DB search
MFSFNMFEPHVGRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGFCYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERHMQHPEEPAEEETDPSNYDMDLGFRAFTGSGNRLDGKK
KGIEPSPAPLDPSDIKRGIPNYEFKVGRITFIRNARQQPRKTDLDETVSNFIAFSGEGQS
LRKKGRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttctccttcaacatgtttgagccccatgtggggcgagttttccagaaccgtttctcc
acacagtaccgctgttattcagtctccatgctggcgggacccaacgaccgctcagatgtg
gagaaaggaggaaagattattatgcccccgtctgctttggaccagctgagcagactaaac
atcacgtaccccatgctgttcaaactcaccaacaagaattcggacagaatgacgcactgt
ggcgttctggagtttgtggcagatgaaggcttctgttacctcccgcactggatgatgcag
aacctgttgttggaagagggcggtctggtgcaagtggaaagtgtcaatctcatggtcgcc
acatactccaaattccagccacagagcccagacttcctggatatcacaaatcctaaagct
gtattagagaatgctttgaggaatttcgcctgtttgactacaggagatgtgatcgccatc
aattataatgaaaagatctatgagttacgtgtcatggagaccaaaccagacaaggctgtg
tccatcatcgagtgcgatatgaatgtggactttgatgctcctcttggatacaaagaacca
gagagacacatgcagcatccagaagaaccagcagaagaagaaacagatcctagtaactat
gacatggacctcggtttcagagcctttacaggatctgggaatcgtctagacgggaagaag
aaaggcattgagcccagtccagcacccctcgatcccagtgacatcaaacgaggaattccg
aactatgagttcaaagtcgggaggatcaccttcatccgtaacgccagacaacagccccgc
aaaacagacttggatgaaacagtcagtaacttcatcgcgttctctggggaaggacagtcc
cttcgcaaaaaaggcagaaagccctga
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