Danio rerio (zebrafish): 436782
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Entry
436782 CDS
T01004
Symbol
supt4h1
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
436782 (supt4h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
436782 (supt4h1)
03019 Messenger RNA biogenesis [BR:
dre03019
]
436782 (supt4h1)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
436782 (supt4h1)
RNA polymerase I system
436782 (supt4h1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
436782 (supt4h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
436782
NCBI-ProteinID:
NP_001002509
ZFIN:
ZDB-GENE-040718-214
Ensembl:
ENSDARG00000113969
UniProt:
Q6DGQ0
LinkDB
All DBs
Position
5:3118748..3127600
Genome browser
AA seq
117 aa
AA seq
DB search
MSLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGV
IAMMSPEDSWVAKWQRIGNFKPGVYAVTVTGRLPPGVVRELKSRGVIYRSRDTAVKT
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggagaccgtcccgaaagacctgcgccacctgagagcgtgtttgttgtgctct
ctcgttaagacgattgatcagtttgaatatgatggatgtgacaactgtgaatcatacctg
cagatgaaaggcaaccgagagatggtttatgaatgtacaagctcttcttttgatggtgtt
attgctatgatgagtccagaagacagctgggtggcaaaatggcagaggatcgggaacttt
aagccgggtgtgtatgcagtaacagtgacgggtcgcttacctccaggtgtggtgcgagag
ctgaagagcagaggcgtcatttacagatccagagacacagccgtcaaaacataa
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