Danio rerio (zebrafish): 436821
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Entry
436821 CDS
T01004
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
436821 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
436821 (taf11)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
436821 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
VpsT-like_REC
Motif
Other DBs
NCBI-GeneID:
436821
NCBI-ProteinID:
NP_001002548
ZFIN:
ZDB-GENE-040718-283
Ensembl:
ENSDARG00000037855
UniProt:
Q6DGT1
LinkDB
All DBs
Position
23:309130..313814
Genome browser
AA seq
206 aa
AA seq
DB search
MADPARVKPEAGTSVDRPKPGEGSSEVPEGSSKSSDPAAGQTAVKEEGKTLSQRPAEDAG
DEEDEGSSSLHPPPAKKLKVEPHDKKKEKRHKVDEDEIQKMQVLVSSFSEEQLNRYEMYR
RSAFPKAAIKRLIQSITGSSVSQNVVIAMSGIAKVFAGEIVEEALDVCEKWGDTPPLQPK
HMREAVRRLKSREQIPSSKHKHILFH
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccggcccgtgtgaaacctgaagcgggcacatcggtggacagacccaaaccg
ggcgaggggtccagtgaggttccggagggcagcagtaagagctctgaccctgctgcggga
cagactgctgtaaaagaggagggcaagacgctcagtcagaggcctgctgaagatgctggt
gatgaagaggacgagggatcttcatctctgcatcctcctcctgccaaaaagctgaaagtg
gagccgcacgacaagaagaaggagaaacgccacaaagtggatgaagacgaaatccagaag
atgcaagttttagtatcatcgttctctgaagagcagctgaaccgctatgagatgtacagg
cgctcggcgttccctaaggcagctattaaaagactgattcagtccatcaccggatcatcg
gtctctcaaaacgtggtcatcgccatgtccggaatcgccaaagtgtttgctggagagatt
gttgaagaagctctggatgtgtgtgagaagtggggggacactccacctctgcagcccaaa
cacatgagggaagccgtgcggagactgaagagccgagagcagattcccagctccaaacac
aaacacatcctcttccactga
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integrated database retrieval system
