KEGG   Danio rerio (zebrafish): 436927
Entry
436927            CDS       T01004                                 
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    436927 (pdlim5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    436927 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   436927 (pdlim5a)
SSDB
Motif
Pfam: LIM PDZ DUF4749 PDZ_6 PDZ_2 LIM_FHL2-3_N
Other DBs
NCBI-GeneID: 436927
NCBI-ProteinID: NP_001002654
ZFIN: ZDB-GENE-040718-401
Ensembl: ENSDARG00000101777
UniProt: Q6DG04 A0A0R4IN44
LinkDB
Position
5:complement(7722001..7844217)
AA seq 551 aa
MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLTDAGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKASSDKLNLSLQKASSLPKPDVAPKDDCVEIIKPVPMTTSIPFSSDITN
STHITSSSNRSARPFGGAGSPPIAFIPSTASAFAPASTAQYPNPLSPPTDGSPNHQPTVP
RPSVYNTPINLYSDENACEVAMGQRRGLLESQGESCQLNGLPRVPITETDIEFYHVPTHG
DASRKRIMEDTEDWRPRTGTSQSRSFRILAQITGTESELDRAQEAEAAKKTTNEDVDDCQ
PSAHITCPVKTMIKAPATPVRNSAGFITPTFGVVSSSTPLGPALDRPMPRPHPKDEASLV
QRAEHIPAGTRTPMCAHCDMVIRGPFLVAMGKSWHPEEFTCAHCSVSLSELGFVEEQGSV
YCQHCYEEFFAPTCSRCHHKILGEVINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPY
CERDFYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCTVCSVSLEGQTFFSKKGKP
LCKKHAHALKI
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgagcggtaaatacagtgtggtgttacagggtccggccccgtgggggttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctgacggatgccggaaaggct
gctaaagcaggagttgcagtgggagatctggtgctgtccatcgacggcatcagcactgac
ggcatgaaccatctggaggcccagaacaagattaaagccagctcagacaaactcaacctt
tctttgcagaaagcttcaagtctgccaaaaccagatgtggcaccaaaggatgattgtgtg
gaaatcatcaaacctgttcccatgacaacctccattccattctcctctgacatcacaaac
tccacccacatcacgtcatcctccaataggagcgctcgtccatttggaggggcggggtca
ccacccatagccttcattccctccactgcatctgcttttgcacccgcctccacagctcaa
taccctaatccactgtctccgcccactgatggctcaccaaatcatcagccgacggtgccc
cgcccatcagtctataacacacccatcaatctttactctgatgaaaatgcctgtgaggtt
gccatgggccagaggcggggcctgctggaaagccagggtgagagctgtcagctgaatgga
cttccccgtgtgccaatcacagagacagacattgagttttatcatgtcccgactcatggt
gacgccagcaggaaacgcatcatggaggacaccgaggactggcgccccaggacgggaaca
tcacagtcccgctccttccgcatcctcgctcaaatcaccggcactgaatctgaactcgat
cgcgctcaggaggctgaagcagcaaagaaaaccacaaatgaggatgtggatgattgtcaa
ccctctgctcacatcacttgtcctgttaaaaccatgattaaagctccagcaacacctgtc
agaaacagcgcaggcttcattactcccacatttggtgttgtgagcagcagtacacctcta
ggccccgccctggatcggcccatgccccgcccacaccctaaagacgaagcctctttggtt
cagcgggcagaacacattcctgctggaactcgcactcctatgtgtgctcactgcgacatg
gtgatcaggggtccatttctggtggcgatgggtaaatcgtggcacccggaggagttcacc
tgcgctcactgcagtgtttctctgagcgagcttggctttgtggaggaacagggctccgtt
tactgccagcactgctatgaagagttctttgctccgacctgctcacgctgccatcacaag
atcctgggggaagtgatcaatgcactcaagcagacgtggcacgtgtattgcttcctgtgc
gcttcctgtcagcaacccatcagaaatgatacgtttcacctggaggatggagagccgtac
tgtgagagagacttttacagtctgtttgggacgggttgccgtggctgtgatttcccaata
gaagcgggagacaagtttctagaggccctgggcggcacctggcacgacacctgcttcgtg
tgcacagtgtgcagtgtcagtctggagggtcagaccttcttctccaaaaagggcaaaccg
ctttgcaagaaacacgctcacgctctcaaaatatag

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