Danio rerio (zebrafish): 437002
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Entry
437002 CDS
T01004
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04136
Autophagy - other
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
437002 (wipi2)
04136 Autophagy - other
437002 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
437002 (wipi2)
03029 Mitochondrial biogenesis [BR:
dre03029
]
437002 (wipi2)
Membrane trafficking [BR:
dre04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
437002 (wipi2)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
437002 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_IFT140_1st
Beta-prop_Vps41
BCAS3_WD40
Dimeth_Pyl
Motif
Other DBs
NCBI-GeneID:
437002
NCBI-ProteinID:
NP_001314718
ZFIN:
ZDB-GENE-040718-488
Ensembl:
ENSDARG00000037871
UniProt:
A0A8M1P910
LinkDB
All DBs
Position
3:complement(40820614..40837383)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKSVPQEEPTTWTGYFGKVLMASTTYLPAHVTEMFTQ
GRAFATVRLPFSGHKNICALAIIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHKLD
GSAEPANEILEQTAHDRPLVAQTYSAAVAKGYSEDQGAVGGAGVEDDMNTLHLDEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgcagccagctgctcttcgccaacttt
aatcaggacaacacatccctagctgttggtaccaagtcagggtacaagtttttctccttg
tcatcggtggacaaattggaacagatctatgaatgtactgacacagaagatgtgtgcatc
gtggagagattgttctccagcagcctcgtcgctatcgtcagccttaaggctccaaggaaa
ctgaaggtctgtcatttcaagaaagggacggagatatgcaactacagctactcgaacact
atactggctgtgaaactaaacagacagcgattgatagtgtgtttagaggagtcactctat
atccacaacattagggatatgaaagtactacataccattcgagagacccctcccaatcct
tccggactttgtgccctgtcaatcagtaatgacaactgctacctggcgtatccgggaagt
gcaacgattggagaagtacaagtttttgacacagtcaacctgagggcagctaacatgata
cctgcccatgacagcccgctagcagctctggcgtttgatgcaagtggcactaaattggcc
acggcttctgaaaagggcaccgtaatccgtgtgttctcgattccagagggccaaaagctc
tttgagttcaggagaggggtaaagagatgtgtgagcatctgttccctggccttcagtatg
gagggactctatctgtctgcctcgagcaacacagagacggttcatatttttaagctggag
acccagagagagaagtcagtgcctcaggaggagcccactacttggacgggatactttggg
aaagtgttgatggcctccacaacatatctgcctgcacacgtaacggagatgttcactcaa
ggacgggcgtttgccacagtcagactgcctttttcaggacacaagaacatctgcgctctg
gccataattcagaagattccacggctgctggtggcggctgcagatggctatctgtacctg
tacaatctggaccctcaggagggaggagaatgcacactaatgaaacaacataagttggat
ggaagtgcagagcctgcgaatgaaattcttgaacagacagctcacgatcggccacttgtg
gcccagacctacagtgctgctgttgccaaaggttacagtgaggatcagggggctgtaggg
ggagctggagtagaggacgacatgaacaccctccacctggatgaagagaacgagcagcct
ccattaatcctggaaacagactga
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