Danio rerio (zebrafish): 445043
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Entry
445043 CDS
T01004
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
445043 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
445043 (syf2)
Spliceosome [BR:
dre03041
]
Complex B
Other components
Prp19-related factors
445043 (syf2)
Complex C
445043 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
445043
NCBI-ProteinID:
NP_001003437
ZFIN:
ZDB-GENE-040801-170
Ensembl:
ENSDARG00000004706
UniProt:
Q6DGP2
LinkDB
All DBs
Position
13:45431695..45443008
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AA seq
238 aa
AA seq
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MASSEEVVAPSNEEEVTETPAAQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLP
SNWEAKKARLEYELLVDQKKKECAERGEDYDRVKLLEISAEDAERWERKKKKRNPDPGFS
GYAEAQLRQYQRLTKQIKPDMENYEKQKEECGEDFHPTSNSLIYGTHVPSKDSINRMVDD
VEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagcgaggaggttgttgctcccagtaatgaagaggaggttacagagactcca
gcagcacagaagagggaagagagacttagaaagttcagagagcttcactttaagaggaat
gaggcccgtaagctgaatcatcaggaggtggtggaggaggacaaaagattgaagctgccg
tcaaactgggaggccaaaaaagcacgtctagagtatgagctcttggttgaccagaagaaa
aaggagtgtgcggagcgtggtgaagattacgaccgtgtgaagctcctggagatcagtgct
gaagatgcagagagatgggagagaaagaaaaagaagagaaaccctgatcctggattctcg
gggtatgccgaggcccagctgagacagtaccagagattgacgaagcagatcaagcctgat
atggaaaactacgagaaacagaaagaagagtgtggagaagatttccaccccacctccaac
agtctgatttacggcactcacgttccctctaaggacagcatcaaccgaatggtggacgac
gtagagaaacagatcgaaaagcgagcgaaatacagccgccgcagggcctacaatgacgac
gctgacatcgattacatcaacgagagaaacgccaagttcaacaagaaggccgaacgtttc
tacggcaaatacacagcagagatcaagcagaacctggagagaggaaccgccgtgtaa
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