Danio rerio (zebrafish): 445483
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Entry
445483 CDS
T01004
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
445483 (med23)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
445483 (med23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
445483
NCBI-ProteinID:
NP_001003990
ZFIN:
ZDB-GENE-040724-82
Ensembl:
ENSDARG00000029157
UniProt:
Q5RIW8
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All DBs
Position
20:complement(2499622..2584128)
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AA seq
1352 aa
AA seq
DB search
MFMDSPEDEKTKLTSCLGAFRQFWSTLPQESHEQCVQWIVRFIHGQHSPKRIAFLYDCLA
MAVETSLLPPRMVCQALISSDSLEWERTQLWALTFKLIRKIIGGVDYKGVRDLLKAVLDK
IQTIPNFVSSAVVQQLLAAREVVEYILDRNACLLPAYFAVTEIRKLCPEGALSHWLLGSL
ISDFVDSFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPTTLRFPLRGMLPYDKDLFD
PQTGLLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDG
GTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSI
QKNALGDFLPVMKLFDLLYPEKECIPVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQ
IPIPHSLKLHHEFLQQSLRNKSLPMTDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGS
MRITLPGTNCMASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSLALAPALV
ETYSRLLVYMEIESLGIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLL
SHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAESEELN
RALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFK
QNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQGSPPLFLCLLWKMLLETDHIN
QIGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDR
LILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMTY
HKKYPEKLYFEGLAEQVNPPIQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSL
ETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCL
SETYLKCGMNAREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHA
LHVTCVELMALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVL
HDRIVSVISSAVLSSGSDWLGYPFQLLDFTACHQSYSEMHCSYVLALAHAVWHHSSIGQL
SLIPKFLSEVLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQH
SNHLAYMDPICDFLYHIKYMFTGDSVKDQVERIICSLRPAMRLRLRFITHISKMEPAAVP
VSNSSSVQQTSSASSPTAQSTAGAAIPLSVTQ
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggacagccctgaggatgagaagaccaaactcacaagctgtttaggagccttt
aggcagttctggagtaccctgccgcaggagtctcatgagcagtgtgtgcagtggatcgtg
cgcttcattcatggtcagcacagccccaaacgcatcgccttcctctacgactgtctggcc
atggcggtggagaccagcctgctgccacccaggatggtgtgtcaggctctcatcagctcc
gacagtctggagtgggaacggactcaactctgggctttgaccttcaaactcatccgcaaa
atcatcggaggagtcgactataagggtgtgagagatctattgaaggccgtgttggacaag
attcagaccatccccaactttgtgagctcagctgtggttcagcagctgctcgcggcacga
gaggttgtggagtatatactggaccgcaacgcctgtctgctgccggcgtacttcgctgtg
actgagatccggaaactttgtccagagggggcgctctcacactggctgttgggcagcctg
atatctgactttgtcgacagtttcagaccgacggcacgtataaactccatatgtgggcgc
tgcagtcttctgcctgtggtcaataattctggggccatctgtaactcatggaagctggac
cccaccactctgcgtttccctctgagaggaatgctgccgtatgataaggacctgtttgat
ccgcagacagggttgctgaggtatgtgctggagcagccgtactccagagacatggtgtgc
aacatgctgggcctcaacaaacagcacaagcagaggtgtccggttctggaggaccagctg
gtggatctggtggtttatgccatggagcgctctgagactgaggagcagtttgatgacggc
ggcaccagccagctcctgtggcagcatctgtccagccagctcatcttcttcgtcctcttc
cagtttgccagcttccctcacatggtgctgtcgctccatcagaagctggcaggtcggggt
ttgatcaagggcagggatcatctgatgtgggttctgctgcagttcatctccggcagcatt
cagaagaacgctctgggagactttctccccgtcatgaagctcttcgacctgctgtaccct
gagaaagagtgtattccagtcccggacatcaacaagccccagtccacacacgcattcgcc
atgacctgcatctggattcacctcaaccgcaaagcccagaacgacaactccaaactgcag
atccccatcccacactcactgaagctgcaccatgagtttctccagcagagtctgcgcaat
aagagtttgcccatgacagactataaaatcgctctgctgtgtaacgcctactccaccaac
tccgagtgcttcacgctgcccatgggcgtcctggtggagaccatctacggcaatggtagc
atgcgcatcactctgccaggcaccaattgcatggcgtccggctctgtcacgccactgccc
atgaacctgctggactccctaaccgtccatgctaagatgagtttgatccacagcatcgcc
acccgtgttattaaactagcccacgctaagtccagtctggctctggctcctgcgctggtg
gagacgtacagccggctgctggtctacatggagattgagtcgctcggcatcaagggattc
atcagtcagcttctgccgaatgtgttcaagtctcacgcgtgggggattctgcacacactg
ctggagatgttcagctaccgcatgcaccacattcagcctcattaccgcgtgcagctcctg
tcccatctgcactcgctcgccgctgtcccacagaccaatcagaaccagctgcacctctgt
gttgaaagcacagctctgcgcctgatcacggctctgggtagttccgaggttcagcctcag
ttcacacggttcctcaacgacccaaaaacagtgctgtcggccgagtctgaggagctaaac
cgagcactcatcctcacactggcccgggccactcacgtcacagatttctttacaggctcg
gactcgattcagggcacttggtgtaaagacatcctgcagaccatcatgaacttcacacct
cataactgggcctctcacactcttagctgtttccctgctccactgcaggcgttcttcaag
cagaataatgtccctcaggagagccgcttcaacctgaagaagaacgtggaggaggagtac
aggaagtggaagtccatgaccaatgagaacgacatcatcacccacttctccatgcagggc
tcgccgccgctcttcctgtgtctgctgtggaagatgctgctggagacggaccacatcaac
caaatcggcttcagggttctggagcgcatcggggcgcgagcgctggtggctcatgtgcgc
acgtttgccgacttcctggtgtacgagttctccacatccgctggcggacagcagctaaac
aagtgcatcgagatcctgaacgacatggtgtggaagtacaatatcgtgaccctggataga
ctcatcctctgcctggcgatgaggagtcacgaagggaacgaggctcaggtctgctacttc
atcatccagcttctcctgctcaaacccaacgacttccgcaaccgcgtcagtgactttgtg
aaggagaacgctccagaacactggctgcagagcgactggcacaccaaacacatgacctac
cacaagaagtatccagagaagctgtatttcgagggtctggcggagcaggtcaatcctcct
atccagctgcagtctcagtatctgcccatttacttcggcaacgtgtgtctgcgcttcctc
cccgtgttcgacatcgtcatccaccgcttcctggagctgctgccggtctccaaatccctg
gagacgctgctcgatcatctgggaggactctacaagtttcatgatcggccggtgacgtac
ctgtacaacacgctgcattattatgagaggcacctacgcgaccgcacaaacctgaagagg
aagctggtgcatgccatcatgagctcgctgaaggacaatcgaacacccggctggtgcctt
agcgagacctacctgaagtgcggcatgaacgcccgtgaagataatgtctggatccctgac
gacacctactactgcaaactcatcggacgcctcgtggataccatggcaggtaaatctcca
ggcccgttccccaactgtgactggaggtttaacgagttcccgaacccggccgctcatgcg
ctgcacgtcacctgtgtggagctgatggctctggcggtcccggggaaagacgtgggcaat
gctctgcttaatgtggtgctcaagagtcagccgctggtgcctcgagagaacatcacggcc
tggatgaacgccatcggactggtcatcaccgctctgcctgagccctactggatcgtcctg
catgaccgtatcgtgagtgtgatcagcagtgcggtgctcagctctgggtcagattggctg
ggttacccattccagcttctggacttcaccgcttgccatcagtcctactcagagatgcac
tgcagttacgttctggctctggctcacgccgtgtggcatcactccagcatcggccagctc
tcgctcatacccaagttcctgtcggaggtcctgaagcccatcgtgaagactgagttccag
ctgctgtacgtttatcatctggtgggcccgtttctgcagcgcttccagcaggagagaacc
agatgcatgctggagattggagtggcgttttatgagatgcttcaggctgtggatcagcac
agcaaccacctggcctacatggaccccatctgtgacttcctgtaccacatcaaatacatg
tttactggggacagtgtcaaagaccaggtggagcgcatcatctgttctctgcgtccagca
atgcgtcttcgtctacgcttcatcacacacatcagtaagatggagccggcggcggtgccc
gtgtccaacagcagcagcgtccagcagaccagcagcgcctcctcacccacagcacagagc
actgctggagccgccataccactgtctgtgacacagtga
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