Danio rerio (zebrafish): 445485
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Entry
445485 CDS
T01004
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
445485 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
445485 (gspt1)
03012 Translation factors [BR:
dre03012
]
445485 (gspt1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
445485 (gspt1)
Translation factors [BR:
dre03012
]
Eukaryotic type
Release factors
445485 (gspt1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
Motif
Other DBs
NCBI-GeneID:
445485
NCBI-ProteinID:
NP_001003992
ZFIN:
ZDB-GENE-040822-36
Ensembl:
ENSDARG00000031048
UniProt:
Q68EH0
A0A8M1N1P8
LinkDB
All DBs
Position
12:21028297..21050032
Genome browser
AA seq
564 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENATSDGTDVV
ASMEISEPVGAVENGETDASAVETWEQKGEPDKEEPGGGSPADTGCFGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSDLCPWYTGLPFIPHLDSLPIFS
RSSDGPLRLPIVDKYKDMGTVVLGKLESGSIAKAQQLIMMPNRHTVEVLSLLSDDVETEY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacactgcccctgattcctgggaacaggaggacgatgttgaggccacg
gctgataccgaacttcagtccgccttcaccgggctcaacgtcaacgctccggagttcgtc
ccatcctttctttcacggggtccaccggaaaacgccacgtctgatggcaccgatgtagtg
gccagcatggagatctcggagccagtgggtgcggtggagaatggagaaacagatgccagc
gcggtggagacgtgggagcagaaaggagagccggataaagaggagccaggaggtggatca
ccggcagacactggatgctttggagatgaagcgcaggatgaaatgatggaggaggacgag
gagatgcccacccccaaactgcctcctcctccaccggacgcccccaagaaggaacacgtg
aatgttgtgttcattggacatgtggatgcaggcaagtctacaattggtggacagattatg
tacctaactggtatggtggaaaaacgcacgctggagaaatatgaacgggaggcaaaagag
aagaacagagagacttggtatctttcctgggctctagacacaaaccaagaggaaagagac
aagggcaaaacagtagaagttggaagagcatactttgaaacagagaaaaagcactttact
attcttgacgccccgggccataaaagctttgtccccaacatgattggaggagcatctcaa
gctgacttggcagtgctggtcatctctgccagaaagggtgagtttgagacgggttttgaa
aagggaggtcagacgagggaacatgccatgctggccaaaacagctggagtcaaacatctg
atagtcctcatcaacaaaatggacgaccccactgtgaactggagcttggatagatatgag
gaatgtaaagagaagttagtgccatttctaaagaaagtgggatttaatccaaagaaagac
attcactttatgccctgttccggactgacgggagcaaacctaaaagaatcatctgacttg
tgtccctggtacacgggattaccattcattccacatctggacagcctgccaatcttcagc
agatcaagtgacggtcccctcagattgcctattgtggataaatacaaggacatgggcacg
gtagtgcttgggaaactggaatctggaagtatcgcaaaagcacaacaacttattatgatg
ccaaataggcacacggtggaggtgttgagtctcctctcagatgatgtggagacggaatac
gcggggcctggtgaaaacctgaagctccggctcaaaggcattgaggaggaagagattctc
ccaggctttatcctatgcaacgctgagaacctctgccactcaggacgcacttttgatgcc
cagattgtcattattgaacacaaatccatcatatgcccaggttacaatgcagtactacac
atccacacctgcatagaagaagtgcagatttcagcgttaatctgtctggtggataagaaa
acaggagaaaagagcaagactcgtccacgcttcgtcaagcaggaccaagtatgcatcgcc
cgtctcagggccgcaggaactatctgcttagagacttttaaagacttccctcagatggga
cgtttcaccttgagagatgagggtaagacaatcgcaatcggcaaggtgctgaagttggta
cctgagaaggactaa
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integrated database retrieval system
