Danio rerio (zebrafish): 447832
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Entry
447832 CDS
T01004
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
447832 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
447832 (capn3a)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
447832 (capn3a)
Peptidases and inhibitors [BR:
dre01002
]
Cysteine peptidases
Family C2: calpain family
447832 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
Alpha_adaptin_C
Motif
Other DBs
NCBI-GeneID:
447832
NCBI-ProteinID:
NP_001004571
ZFIN:
ZDB-GENE-040912-97
Ensembl:
ENSDARG00000041864
UniProt:
Q66HU4
LinkDB
All DBs
Position
17:45305445..45346637
Genome browser
AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPIRFSGQDYTLLKQEYLQKKTLFEDETFPATV
DSLGYKELGHKSNKVKNIVWKRPKEICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVIPQEQSFSEQYAGIFHFQFWRYGDWVDVVVDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKELYKIMQKALERG
SLMGCSIDSLVPARFETRTATGLVKGHAYSVTAVEECKQSQQKESRVRLVRLRNPWGQVE
WNGPWSDNSKEWESLSKAEKEKLQQQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVAL
MQKNRRKERKLGANLLTIGFSIYEVPKEMHGNKQHMQKEFFMSTTAKARSRAYINLREVT
QRFRLSPGEYVIIPSSYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPSPASTGEES
EEDQQFLSIFQHIAGDVSTGEAVSAWGSNMEVSANELKDVLNKVVSKHKDIHTESFSREC
CRSMIALMDMDGTGRLNLQEFRQLWNKIKQWQEIFKRYDFDHNDTISSYEMRNAINDAGF
RLNNQLYDIITMRYANESMNVDFESFISCLVRLEGMFRAFQAFDQCGDGSIRLSVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacgccgtctgggttcttctgcgaccgtttaattcgggagagggagagaagg
gatggcgaagggtcgctgagcaaacccattcgcttcagtggccaggactacaccctcctc
aagcaggagtatctccagaagaagaccctgttcgaggacgagaccttccctgctactgtg
gactctctgggctataaagaactgggccacaagtctaacaaagtcaagaacatcgtctgg
aaacgtcccaaggagatctgcgataacccacagttcattgtcggaggcgctagcaggact
gatatctgccagggagatctgggtgactgctggttgcttgcagccattgcctgtctgact
ctgaatgacaagctgctgtatcgtgttattcctcaagagcagagcttctccgaacaatat
gcaggaattttccatttccagttctggcgatatggggattgggtggatgttgtggttgat
gaccgcattcccaccttcaacaaccaactggtgttcaccaagtctgctgagaggaacgag
ttctggagcgctcttctggagaaggcttacgctaagcttcatgggtcctatgaggccctg
aagggtggaaacacagccgagggaatggaggacttcactggtggagtgactgaattctac
gagatgaaggaggcgcccaaagagctgtataagatcatgcagaaagctctagagagaggc
tcactcatgggctgctccattgattctctggttccagcccgctttgaaactcgtactgcg
acaggtcttgtgaagggtcatgcctactctgtgaccgctgttgaggagtgtaaacagagc
cagcagaaggagtctagagtgcgtctggtgcgtttgcgtaacccctggggtcaagtagag
tggaatggaccatggagtgacaattctaaagaatgggaaagtctttctaaagcggaaaaa
gagaaactccagcaacagaacgctgaagatggagagttttggatgtcgtttgaagatttt
aagaaaaattacaccaaaattgagatttgtaacttgacacctgatgccctggaggacgat
aagctacataagtggacagtgtctgtcaatgagggccgctgggtgagaggctgctctgcc
ggaggatgcagaaactatccagacacattctggacaaacccacaataccgtctgcgtctc
ctggaggaagatgacgatccggaggatgatgaagtggcctgcacatttgttgttgctcta
atgcagaaaaacagacgtaaagaacgcaagttgggtgcgaatctcttgaccattggattt
tccatctatgaggtgccaaaggagatgcatggaaataagcagcacatgcagaaggagttc
ttcatgtctaccaccgctaaggctcggtccagggcctacattaacctgcgcgaggtcacc
cagcgtttccgtctgagtcccggagagtacgtcatcattccctcttcttacgagccccat
caggaaggcgagttcatcctccgcgtcttctctgaaaagagaaatacttctgaggagata
gagaacaggattgaagctgatcatccagtgccttctccggcttcaactggggaggagagc
gaagaggaccaacagttcctgtccattttccagcacatcgcgggggacgtgagtactggg
gaggcagtgagcgcttgggggagtaacatggaggtctctgccaacgagcttaaagatgtc
ttgaacaaggtggtgtctaaacacaaggacattcacaccgagagcttcagtcgagagtgc
tgtagaagcatgattgccctcatggacatggatggaacaggaagacttaacctgcaagag
tttagacaattgtggaacaaaatcaaacagtggcaggaaatctttaagcgctatgacttt
gatcataatgacactatcagcagctatgagatgagaaacgccatcaatgacgcagggttc
cgtctgaacaaccagctgtatgacatcatcaccatgcgctacgccaacgaaagcatgaat
gtcgactttgagagtttcatcagctgccttgtgcgactggaggggatgttcagagcattc
caggcctttgaccaatgtggagatggcagcatcaggctcagtgtactggagtggctccag
ctaaccatgtacgcgtag
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