Danio rerio (zebrafish): 447837
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Entry
447837 CDS
T01004
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B precursor
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
447837 (lingo1b)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
447837 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
LRR_RPS2
V-set
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
447837
NCBI-ProteinID:
NP_001004576
ZFIN:
ZDB-GENE-040912-136
Ensembl:
ENSDARG00000035899
UniProt:
Q66HV9
LinkDB
All DBs
Position
7:48460226..48484917
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AA seq
622 aa
AA seq
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MTFLQVTIKMVAREASGHSYLVACWQPILILMLGTVLSGSATGCPSRCECSAQERSVVCH
RRKLITLPEGIPIDTRLLDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNL
LGLRTLGLRNNNLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDND
LVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLTLKLRHLNVNVIRDFSFRRL
YRLKILEIANWPLLESLTAKSLHGLNITTLSITNCNLTAVPYVAIQHLVYLRFFNLSFNP
IEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVSSNSLSTLEESAFHSV
GNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQPSCETPEFLQGKEFKDFPDVLPPNY
FTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPTPMIMWQSPKKQFITTKSIGRLSVSL
DGTLEVRYAQIQDNGTYTCFAVNAGGNDTRLAHLHVHSYSPNWPHQPNKTFAFILNQPSD
NSANGTGAMDPFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRKVDGENSPNEGSHKISMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttctgcaggttaccatcaaaatggtggccagagaggcaagtgggcacagctac
ctggtggcatgctggcagcccattctcattctgatgctgggtactgtgctgtctggctct
gccacgggctgcccctctcgatgcgagtgcagtgcccaggagcgctcggtcgtgtgccat
cggcgaaagctgatcaccctccccgagggaattcccattgacacgcggctgttagacctc
agcaagaaccgcttgaaagccatcaaccctgaggaatttctcaactacccacaactggag
gatctacagcttaatgagaacataatttccgtcattgaaccaggggccttcagcaacctc
cttggcttgcgaacgctgggactacgcaacaataatctcaagctgatccagctgggtgtt
ttcactggcctcagtaacctcactcggttagacattagtgagaataaaattgtcattttg
ttggactacatgtttcaagaactctacaacctgaaagagctggaggtgggggataatgac
ctggtgttcatttcccacagggcctttcatggcctcagcagcctggagcagcttacaatg
gaaagatgcaacctgacctctgtgcccacagaggccttcagtcatcttcacaacttgctg
acccttaagctgcggcatctcaacgtcaatgtcattcgagacttttcctttaggaggctc
tatcgactaaaaatcttggagatagctaactggcctctcttagaatccttgaccgcaaag
tccctgcacgggctgaatatcacaactttgagcatcacaaactgcaatctcactgccgtc
ccttacgtggccattcaacacctggtgtacctccgctttttcaacctgtccttcaatccc
attgaggttgtggagggcaacaaaatgcacaatttgctgaggctccaggcgtttcactta
gttgggggccggctagtcagcattgagccctattcattcaaaggactcaactaccttcgg
gttctcaatgtatccagcaatagtctaagcactttagaggaatctgcctttcactcggtg
ggcaacttggagactctagctcttcatgacaaccccctggcatgcgactgtcgtctcctc
tgggtctttcgccgccgatggagacttaatttcaaccgccagcagccatcttgcgaaacg
ccagagtttttgcagggtaaggagtttaaagacttcccggatgttctcccaccaaattat
ttcacttgtcagaagtccaagattcgggatcacaaagccattcatagatttgttgatgag
gggaccactgtgcaattcccttgccaagcagatggagacccaactcccatgattatgtgg
cagtctccaaaaaagcaattcatcacaactaaaagcatcggccggctgtctgtgtccctg
gatggcaccctagaggttagatatgcccaaatacaagacaatggcacgtacacgtgcttt
gctgtcaatgcaggaggtaatgacacccgtttggctcacctacatgttcatagctactct
cccaactggccccatcagcccaataagacctttgcctttattttgaaccagcccagtgat
aacagtgccaatgggactggtgcgatggatcccttcccctttgatatgaagaccctcatt
attgctaccaccatggggtttatctctttcctgggagtggtcctcttctgtctggtgctc
ttgttcctgtggagtcgagggaaaggcaatgccaagccaaacattgagattgagtatgtg
ccacggaaagtagatggagaaaacagcccgaatgagggatctcacaagatcagtatgaag
atgatataa
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