Danio rerio (zebrafish): 447857
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Entry
447857 CDS
T01004
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
dre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
447857 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
447857 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
447857 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
447857 (gtf2h1)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
447857 (gtf2h1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
447857 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
447857
NCBI-ProteinID:
NP_001004596
ZFIN:
ZDB-GENE-040912-164
Ensembl:
ENSDARG00000026701
UniProt:
Q66I03
LinkDB
All DBs
Position
25:complement(3196855..3217115)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGENTTFHFANESTALKDREAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRMSLNSVDHSPSSNNVQEVGISAAFLADIRPQTDG
CNGLRYNLTSDIIESIFRTYPTVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRINTGQQ
DIFSECAKQDEKGLKSMVTQGVKNPMVDLLALEDKTLDEGYGTAAAPPASNTANKTLREN
SNSAIIKRFNHHSAMVLAAGLRKAEAPSDQASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYDDLQNDSGRKTIALNLKKSDRYAHGPVPLQSQHYSTSQDIINSISIIQHEMRSYKPQL
TQVMSSSAASSAISALSPGGVLMQSAGQQTIHQLVPADVQSELKHLYTAAGELLRHFWSC
FPVNTPFLEEKVLKMKSNLERFQVTKLRPFQEKIQRQYLSTNLTGHLEEMFQAAYSKFQA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtccgaggaggtgttgttggtggtgaagagggtacgtcagaggaaacag
gacgggacactgtaccttatggctgagaggatcgcctggggacctgagggaaaagaccgc
ttcactgtcagccacctctacgccgacatccgctgccagaagatcagtcctgacggtaaa
gccaagattcagcttcagctggttctgcacacaggagaaaacaccacttttcacttcgcc
aatgagagcacagcgctgaaggatagagaagccgccaaagagcttctccagcagctcctg
cccaagttcaagaagaaggccaataaagagctggaggagaagaacaggatgttgcaggaa
gaccccgtcctgttccagctctataaggacctggtggtgagtcaggtgatcagcgctgag
gagttctgggccaatcggatgagcctcaattcagtggatcactcgccctccagtaataac
gtacaggaagtgggcatctctgctgccttcctggccgacatcagaccacagacagacggc
tgtaatggcctgcggtacaatctgacctctgacatcatcgagtcgatcttcaggacttac
cctacagtcaagcagaaatacgcagagaacgttcctcacaacatgacggagaaggagttc
tggacacgtttctttcagtctcattatttccacagagatcgcatcaacacgggccagcag
gacatcttctctgagtgtgccaaacaggacgagaagggcctgaagtctatggtgacccag
ggagtgaagaacccaatggtggatctgcttgcactcgaagataaaacgttagatgagggt
tacggcacagcggcggctccccctgcgtcaaacacagccaacaaaacactcagagaaaac
agcaactccgccatcatcaagcgcttcaaccaccacagtgccatggtcctggcagccggc
ctgcggaaagcggaagcccccagtgatcaagccagcgagacgagcagcacggatggaaac
tccagagattcagatttctttcagccgccacttaaaaaggtgaaattacaggaagccata
gagtatgatgacctgcaaaacgactcgggccgaaagaccatcgctctgaacctgaagaaa
tcagacagatatgcccacgggccggtccctcttcagtcgcagcattacagcaccagtcag
gacatcatcaactccatcagcattatccagcacgagatgaggagctacaaaccccaactc
acgcaggtgatgtccagcagtgcggcgagctcagccatcagcgctctttcacctggagga
gttttaatgcagagcgcaggccagcagaccatccaccagttagtgcccgctgatgttcag
agcgagctgaagcacttatacacggccgccggagagctgctccgacacttctggtcctgt
ttccccgtcaacactccctttctggaggagaaggtgttgaaaatgaaatccaacctggag
aggtttcaggtgaccaagctccgcccctttcaagagaagatccagcgacagtatttgagc
actaatcttacaggccacctggaggagatgtttcaggctgcatacagcaaatttcaagcc
tggcagacacgccgaatgatgaggaaaacctga
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