KEGG   Danio rerio (zebrafish): 449549
Entry
449549            CDS       T01004                                 
Symbol
zgc:100918
Name
(RefSeq) Ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04137  Mitophagy - animal
dre04140  Autophagy - animal
dre04144  Endocytosis
dre04145  Phagosome
dre04148  Efferocytosis
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    449549 (zgc:100918)
   04145 Phagosome
    449549 (zgc:100918)
   04140 Autophagy - animal
    449549 (zgc:100918)
   04137 Mitophagy - animal
    449549 (zgc:100918)
   04148 Efferocytosis
    449549 (zgc:100918)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    449549 (zgc:100918)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    449549 (zgc:100918)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    449549 (zgc:100918)
   04031 GTP-binding proteins [BR:dre04031]
    449549 (zgc:100918)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    449549 (zgc:100918)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   449549 (zgc:100918)
  Exosomal proteins of other body fluids (saliva and urine)
   449549 (zgc:100918)
  Exosomal proteins of colorectal cancer cells
   449549 (zgc:100918)
  Exosomal proteins of bladder cancer cells
   449549 (zgc:100918)
GTP-binding proteins [BR:dre04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    449549 (zgc:100918)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 PduV-EutP nSTAND3 Septin AAA_16 AAA_22 NTPase_1 AAA_7 AAA_24 G-alpha AAA_5 DUF5992 SRPRB ATPase_2 ABC_tran NB-ARC NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 449549
NCBI-ProteinID: NP_001005591
ZFIN: ZDB-GENE-040927-2
Ensembl: ENSDARG00000087243
UniProt: Q641M4
LinkDB
Position
10:complement(47990878..48004731)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPVSSGDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcttctcgtaagaaggtgctgctgaaggtgatcattctgggggattctggtgttggg
aaaacctctctgatgaaccagtatgtcaacaagaagttcagcaatcagtataaagccacc
atcggcgcagactttcttaccaaggaggtgatggtggacgacagactggtgacgatgcag
atctgggatacggcaggacaggagcgtttccagtctctcggggtggcgttttaccgtggt
gctgactgctgtgttctggtgtacgatgtgaccgcgcctaacaccttcaagactctggac
agctggagggacgagttcctgattcaggccagtcctcgagacccggagaacttccccttc
gtggtgctcggaaacaagatcgacttggagaacagacaggtgacgacgaaacgagcccag
gcgtggtgtcagagcaaaagcaatatcccgtactttgaaaccagcgcaaaagaggccatc
aatgtggaccaagctttccaaaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtacgatttccctgaccagatcaaactgcgagacgacagacctgtgtcctccggt
gatggctgcagctgctga

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