Danio rerio (zebrafish): 449661
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Entry
449661 CDS
T01004
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
449661 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dre01007
]
449661 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
449661 (tars1)
Enzymes [BR:
dre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
449661 (tars1)
Amino acid related enzymes [BR:
dre01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
449661 (tars1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
449661 (tars1)
Prokaryotic type
449661 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Tudor_4
Motif
Other DBs
NCBI-GeneID:
449661
NCBI-ProteinID:
NP_001005932
ZFIN:
ZDB-GENE-041010-218
Ensembl:
ENSDARG00000013250
UniProt:
Q5XIZ3
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Position
5:45218028..45242777
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AA seq
624 aa
AA seq
DB search
MADESVTDQLKELKMEEKKNTKDGGKKKNKNAAGDAGGKTELSPPPQYIDERLSIYNKLK
EEHDALLAEKAAKESKPIKITLPDGKVVDGESWKTTPYQVACGISQGLADNTVISKANNG
VWDLDRPLEEDCSLVFLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYY
DMYLDNEGVSSNDFPCLENLCKKIIKEKQPFERLEVKKETLLEMFKYNKFKCRILNEKVT
TPTTTVYRCGPLIDLCRGPHVRHTGKIKAMKIHKNSSTYWEGKADMESLQRIYGISFPDP
KMLKEIFALKPMNCPGHCLMFDHRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQ
QDDAHIFCSMDQIESEIKGCLDFLRTVYDVFGFTFKLNLSTRPEKFLGEPEVWDQAEKQL
ENSLNDFGEKWVLNPGDGAFYGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHD
GDDKKRPVIIHRAILGSVERMIAILTENYGGKWPLWLSPRQVMVVPIGPTCDEYAQRVQK
EFHKVGLMTDVDLDPGCTLNKKIRNAQLAQYNFILVVGEKEKSSDTVNVRTRDNKVHGER
SLTDCMERLKQLKASRTRNAEEEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagtgtgactgatcaattgaaagaactgaaaatggaagaaaagaagaat
actaaagatggaggaaagaagaaaaacaagaatgctgctggagatgcaggtggaaagact
gagctgagtcctccaccacagtacattgatgagcgcctgtccatttataacaaactaaag
gaagagcatgatgcccttctggctgagaaagcagcaaaagaaagcaagcccatcaagatc
acactgcctgatggaaaagtcgtagatggagagtcctggaagaccacaccttaccaggtt
gcctgtgggatcagtcaaggccttgctgataatactgtgatctccaaagtgaacaacggg
gtatgggatctggacaggcccctagaggaagactgcagtctagtgtttctcaaatttgac
gatgaagaggcacaagcggtttactggcactcaagtgctcacataatgggagaggccatg
gagagagtctatggtggctgcctatgttacggaccacccatcgaaaatggcttttactat
gatatgtatcttgataatgaaggtgtatcgagtaatgatttcccctgtttggagaacctg
tgtaagaagatcatcaaagagaagcagccctttgagaggctagaggtaaagaaggagact
ctgctggagatgttcaagtacaacaagttcaagtgcaggatcctgaatgaaaaggttacc
accccaaccactacagtgtacaggtgtggacccttgattgatctgtgcagagggcctcat
gtaagaaatactggaaaaatcaaggccatgaagatccacaagaattcctctacatactgg
gagggcaaagctgacatggagagccttcagaggatctatggcatctctttccctgatccc
aagatgctgaaggagatctttgccctcaagcctatgaactgccctggacattgtctgatg
tttgaccaccggccacgttcttggagggaacttcccctgcgtctggctgattttggggtt
ttgcatcgtaatgagttgtctggagctctgactggcctgacaagagtcagacgcttccaa
caagatgatgctcacatcttctgctcgatggaccagattgagtctgagatcaaaggttgt
ctggacttcctgcgtacggtgtatgatgtgtttggcttcacatttaaactcaacctttcc
accaggcctgagaagtttctaggagaacctgaagtgtgggatcaggctgagaagcaactg
gagaacagtctgaatgatttcggagagaaatgggttctgaatcctggtgatggggctttc
tatggaccaaagattgatatccagataaaggatgccatcggcaggtatcaccaatgtgcc
accattcagctggacttccagctgcccattcgcttcaatctcacatttgtaagtcatgat
ggtgatgacaagaagagaccagtgatcatccacagagccatcctgggctcagtggaacgg
atgatcgctatcctgacagaaaactatggagggaaatggccactttggttgtccccgcgt
caggtgatggtggttcctattggacccacctgtgatgaatacgcccagagagtacaaaag
gagttccacaaagttggtttgatgacggatgtggacttggacccaggctgtactctgaac
aagaagatcaggaatgctcagttagctcagtacaacttcattttagtggtgggtgagaag
gagaagagcagcgacacagtgaatgttaggactcgtgacaacaaggtgcacggagagagg
agtctgacggactgcatggagcgcctcaaacagctgaaagcctccagaacccgaaacgca
gaggaagaattctga
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