Danio rerio (zebrafish): 449878
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Entry
449878 CDS
T01004
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
449878 (trdmt1)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
449878 (trdmt1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
449878 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
449878
NCBI-ProteinID:
NP_001018153
ZFIN:
ZDB-GENE-041008-138
Ensembl:
ENSDARG00000034518
UniProt:
Q588C1
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All DBs
Position
24:complement(36325196..36347470)
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AA seq
381 aa
AA seq
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MENTERLRVFELYSGIGGMHYALKESLVPAEVVAAVDVNTTANLIYKHNFPTTQLLPKTI
EGMTLQDFDRLNFDMILMSPPCQPFTRIGLQGDVADPRTKSFLYILDLLPRLSKRPRFIL
LENVKGFESSAARDALLQTLRECDYSFQEFLISPTSLGIPNSRLRYFLIAKRAPETFSFP
VSTEIIEGFPMSESTDGLSVPYDHPTSSASEREKTIMFKLETEEDLERKRKQNSQESVRR
LLDFLQEEEEDMEPYLLPPKTLLRYALVMDIVQPSSRRSVCFTKGYGHYVEGTGSVLQSC
MDVDLETVFKNLDQLSEEDKLKQLLRLKLRYFTPREISRLMGFPDHFTFPKHISFKQQYR
VLGNSLNVHVVSHLIRLMLSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacggagcgactgagagtatttgaactatacagcgggataggaggaatgcat
tatgctttaaaggagagcttagttccagcggaagttgtagctgctgtggatgtcaacaca
acagccaatctaatctacaagcacaacttccccactacacaactcttgccaaaaaccata
gagggaatgacgttacaggattttgacaggctgaattttgacatgattttgatgagccca
ccgtgtcaacctttcaccaggattggtttgcagggagatgttgccgaccctagaacaaag
agcttcctgtatatcctggatcttctgccaaggctcagcaagcggccacgcttcattctg
ctggagaatgtgaagggctttgagagctcagctgcaagggatgctttgcttcagaccctg
agagagtgcgactacagctttcaggagtttctgatttctccaacatctcttgggatccct
aattctaggctcagatacttcctgattgcaaagagagcaccagaaaccttctctttccct
gtttcaactgagattattgagggcttccccatgtctgaatctacagacggtctctctgtt
ccatatgatcatcccacatcatctgcatctgagagagaaaagacgatcatgtttaagcta
gagacggaagaagatttggaaaggaagagaaagcagaacagtcaggaatcagtcaggagg
ttgctggactttctgcaggaggaggaagaggacatggagccgtatctgctgcctcccaaa
accctgctcagatacgctctggtgatggatatagttcagccaagcagcaggagatcggtc
tgctttactaaagggtacggtcattatgtagagggcacgggctccgtcctgcagtcatgt
atggatgtggatctggagacggtgtttaagaatctggatcagctttcagaggaagacaaa
ctcaagcagctcctcaggctcaagctcagatacttcactcccagagaaatcagcagactc
atgggcttcccggatcatttcacatttccaaagcacatttccttcaaacagcagtaccgt
gtgttggggaacagcctgaacgtccacgtagtttcacatcttatacgtctaatgctctca
aaatag
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