Danio rerio (zebrafish): 450080
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Entry
450080 CDS
T01004
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
dre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
450080 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
450080 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
450080 (mnat1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
450080 (mnat1)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
450080 (mnat1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
450080 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-C3HC4
zf-UDP
pre-PUA_NIP7
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
450080
NCBI-ProteinID:
NP_001006100
ZFIN:
ZDB-GENE-041010-203
Ensembl:
ENSDARG00000002077
UniProt:
Q5XJT0
LinkDB
All DBs
Position
13:31648301..31681951
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPAIGKEVEIRKKVLKIYNKREFDFSSLTEYNDYLEQVEDIVFNLANNMDVEMTKQ
KMEQYQRDNKDVIQRNKAKLTREQEELEELLLQEQQDSELRRLETLQEEQRQLQAKRKNK
QALLDELENSKLPAAVLLAQHKDRAAHLETQIEKQKQNVKPTNIFSTGIMMGQTVSLASV
SRVEEVLYCYQPLYIDTYGPPVPELDQLGRKGFLNHVRAASLQDQAGGYTSGLACHRAIQ
DAFSGLFSL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgacaaaatacagaaatccgtctctgaag
ctgatggtgaatgtgtgcggacacacgctgtgtgagagctgtgtggacatgctgtttgtc
cgtggttctggtaactgtgtgcagtgtgacactcctctcagaaagagtaatttccgtgtg
cagctcttcgaagatccagccatcggtaaagaggtggagattcgcaagaaggtcctcaaa
atttataataagagagaattcgatttttcctctctgactgagtataatgactatctggag
caggtggaagacatcgtgtttaacctggccaataacatggatgtagaaatgaccaagcag
aagatggaacagtatcagcgagataacaaagatgttatacagagaaacaaagcaaaactg
acgcgcgagcaagaggagttggaggagctgttgttgcaggagcagcaggattcagagctg
aggagactggagaccctgcaggaggaacagaggcaactgcaggctaagaggaaaaacaaa
caggccctgctggatgaactggagaattccaagttacctgcggctgtgctattggcccaa
cataaagacagagcagcccatctagagacccagatagaaaaacagaaacaaaacgtcaaa
cccacaaacatcttctcgactggaataatgatgggtcagaccgtatctttggcttctgtg
tcccgcgtggaggaagttttatattgttatcagcctctgtacattgacacatatgggccg
cctgttccagaattggatcagctaggccgaaaagggtttctgaatcacgttcgcgccgcg
tctctgcaggatcaggctgggggttatacatcaggactggcctgtcatcgggccatccag
gatgctttcagtggcctcttctccttgtga
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