Danio rerio (zebrafish): 474317
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Entry
474317 CDS
T01004
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
474317 (irx6a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
474317 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
474317
NCBI-ProteinID:
NP_001018869
ZFIN:
ZDB-GENE-040712-5
Ensembl:
ENSDARG00000034420
UniProt:
Q503Z8
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Position
7:complement(35511728..35516254)
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AA seq
484 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSATPSTTCCDSISRSVTEGSSASQTAASFCCPSYE
NRLLASTRTELNAALGMYGSPYAAAAAAAGQNYANYFPYSADPSAIYSSLNPQYEIKEGS
GSLHSTITQPATYYPYDHSLGQYQYDRYGTVDFNGSTRRKNATRETTSTLKTWLYEHRKN
PYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKEDLDSKDS
KDEQDLQFSDLDDMEDEDCDKLDSDCEKSGQDDLPTSSPPKRDCNPDIPLHSNFPSFPCG
LKSLGPLNPDYLDHLGSKPQQQQPSPQSTSINTVALSHFESSEKPRIWSLARTAAAGVVL
GTQHVGDVRTGPVDCQMQGVRLPTVGAVQCGELKGLQDPTNLSNTESLFQEGLQGIHKAY
SSGSFKTLQLHSSSYPGLTESCQYSSMEGFPSAGKTETESSELSDTCPTIQEAKTTAFRP
VMKR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtccttctctcagtttggatatccttacaatgcaact
tctcagtttttcgtgtcggcaacccccagtacgacttgctgcgattcgatatccaggtcg
gtgacagaaggatcgagcgcatcgcagaccgcagcctccttctgctgtccctcctatgag
aaccggctgctggcgagtacacggacggagctcaacgccgcgctcgggatgtacggctcc
ccttacgcagcagcagcggccgcagccgggcagaactacgccaactactttccgtatagc
gccgacccctccgccatctactccagcctgaacccacaatatgaaatcaaagaggggtca
ggcagtcttcatagcactataacacaaccagccacttactatccatatgaccactcactc
ggacagtaccagtatgacaggtatgggacagttgattttaatggatcaacacggagaaag
aacgccacacgtgagacaacaagtacgcttaaaacatggctttatgagcaccgcaaaaac
ccttatcctacaaagggtgaaaagatcatgctggccattatcaccaaaatgaccctcacg
caagtgtctacctggtttgccaatgctagaagacgactaaaaaaagaaaacaagatgact
tggtcccccaaaaacaaagcaggcgatgacaggaaggaagacctcgactccaaagacagt
aaggatgagcaggacctgcagttcagtgacctggatgatatggaggatgaggactgtgac
aagctggacagtgactgtgaaaaatcaggtcaggatgacctcccgacctcctcccctcca
aagagagactgtaaccctgacatccctctccactccaacttcccatcttttccctgtggt
ctgaagagtttggggcctctgaacccagactacctagatcatctgggctccaaaccacag
cagcaacagccctcacctcagtccacctccataaacactgtggcactctctcactttgag
tcatcggagaagccccggatctggtcgttggcacgtacggccgcagcaggggttgtacta
ggcacacagcatgttggggatgtacggactgggcctgtggactgtcagatgcagggagtc
cggttacccacagtcggagcagtgcagtgtggggagctgaagggccttcaggaccctaca
aacctcagcaatactgaaagcctttttcaagaaggactacaggggatacacaaggcatac
agtagcgggagcttcaagacactacaacttcactcttcatcatatcctggactgacagaa
tcctgccagtactcctcaatggaaggcttccccagtgcaggaaagacagagacagaatcc
agtgagctcagtgacacatgcccaacaatccaggaggctaagaccactgcattcagacct
gtgatgaagaggtga
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integrated database retrieval system
