KEGG   Danio rerio (zebrafish): 492761
Entry
492761            CDS       T01004                                 
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    492761 (tbl3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dre03009]
    492761 (tbl3)
Ribosome biogenesis [BR:dre03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    492761 (tbl3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Utp13 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Cytochrom_D1 Pox_TAP
Other DBs
NCBI-GeneID: 492761
NCBI-ProteinID: NP_001007403
ZFIN: ZDB-GENE-041114-104
Ensembl: ENSDARG00000052344
UniProt: Q5U3Q5
LinkDB
Position
3:complement(62173159..62194652)
AA seq 897 aa
MAGKTLLFKSNYAVSSRIEPFYKGGRVQVSADEQHIFCTYGPKINILQISTGKIIHSIEQ
EDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTL
LATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLR
SSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVV
LLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTEDEDAEDE
ERLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHI
AVATNSSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSG
RVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTE
RAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQI
LGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWKDVTEVELAEEQAKQEDQVLKQQ
ELQNLLHEHQYVKALGVAISLDQPHTAPRVIREIRQREDGVQELEKTLLKLRKDQKESVL
RYCTVWNTNSRSCLDAQAVLKVLLTHLSPEEMLQFQSAHTHLQALVPYTERHMQRINRLL
QASMFLDYMWQKMRITGAMDSVNMQEDEDDDGVQSVFITDKQPMQTTEEEEENEEMQCSG
DSEQRLHEDEAVCTSKTAAGKLPNTVDQLLDSDEDKEEEEFSCKPAASVLQEIVSVS
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggctgggaaaacgctgctcttcaagtcgaattatgcggtctccagcagaatcgagcct
ttctataagggaggtagagtgcaggtcagtgcagacgagcagcacatcttctgcacttat
ggaccaaagatcaacatcctgcagatcagcacagggaagatcatacacagcattgaacag
gaggatcaggaggacatcacagcattcgctctcagccctgatgatgagatgttagtgagc
gccagcagggctctgctcctcaggcagtgggactggaagcagcagcagtgtcgtcgctcc
tggagggccgttcacagtgtgcccgtggccagcatgagcttcgattgcacctccacactg
ctggctacaggcggctgtgacggcaccatcaaactgtgggacgtgatcaagcagtactgc
acacacaacctcaaaggctcctctggcgtcgtgcatttggtggagtttcacccagacatc
agccggctgcagctcttctcctcgtcctcagactgtgcgatccgcatctgggacctgcgc
tccagccgctgtgtgtgtgtgctggagagccactacagccccgtcactgcgctcgcgttc
tccccggacggacacacactcgtcagctctggcagagataagatctgttctgtgtgggac
ctgcaggagcagaaggtgaagaggaccatcccggtctatgaggctgtggaaggtgtggtt
ctcctgtcgggctctgctgactactcagagatgggagtgaagagtgacgcgttacacctg
gtcacggctggcagtaaaggtgtcctgcgtgtgtgggacagctcctcgtcccgctgtgtg
ttcacccagactctgcctgatgcttcgtctcacactgaagatgaagatgctgaagacgaa
gagcgcctgggcctcctgcagctcctgctgctgccccgcaccggcagactgatcacagtc
actgcagaacacaacatcctgctgtaccagacgcccacactcgctgtacagcagcagttc
gtgggctacaatgacgatgtgctggatgtgaagtttgtggggaaggacgacacacacatc
gcagtggccaccaacagctctcagctgaaggtgtttgagctgagcaccaacagctgccag
atcctgcacggacacactgataccatcttatccatcgacgtcttccgcaaaggcagcatg
tttgcgacctgtgcaaaggataagagtgtgcgtgtgtggaggatggatgtgagcagtggt
cgtgtccactgtgtggctcagggaaccggacactccaatgctgtgggctccatcgcctgc
tccaggatgaagcagcagttcgtggtgtcgggcagtcaggactgcacagtgaaggtgtgg
gatctgcccgagactactggagctgaaggagtgatgatgatgaaggctcgatccactgag
agagcgcacgagaaggatgtcaacagtgtgtgcgtctcccccaatgataagctgctggcg
tcgggctcacaggaccgcacggccaaactgtgggctctgagtgacctgcgtctgctgggg
gtctgccggggccaccgccgcggggtctggagcgtgcagttctccccggtggatcagatc
ctggggtccgcatcggccgacggcagcgtcaggatctggagcattcaggactttagctgc
cttaagacgtttgagggtcacgatgcctccgtgctgaagattatattcgtcagtcgggga
actcagctggtgtccagtggctctgacggcctggtgaagctgtggaccatcaaaactaac
gagtgtgtgcggacactggatgcgcatcaggataaggtgtgggctctgcacggcggctgc
agggacgagctgatggtcaccggctccgcagactccaccatcaccgtctggaaggacgtg
actgaagtggagctggcagaggaacaggccaaacaagaggatcaagtgctcaagcagcag
gagctccaaaatctcctccatgagcatcagtatgtgaaggctctgggtgtcgccatctct
ctggatcagccacacactgccccgcgggtcatcagagaaatccgtcagcgggaggacggg
gtgcaggagctggagaagacgctcctcaaactgcggaaggatcagaaagagtcagtgctg
cgctactgtacggtgtggaacacaaactcgcgcagctgtctggacgctcaggctgtgctg
aaggtgctgctcacacacctgagccctgaggagatgctgcagttccagagcgcgcacaca
cacctgcaggccctcgtcccatacaccgagagacatatgcagcggattaaccggctcctg
caggcctccatgtttctggattatatgtggcagaaaatgcgcatcacaggtgctatggac
agtgtgaacatgcaggaggatgaagatgatgacggtgttcagtcagtcttcatcacagac
aaacagcccatgcagaccacagaggaagaggaggaaaatgaagaaatgcagtgttcagga
gactcagagcagcgtctgcatgaggacgaagccgtctgcacgtctaaaactgctgctggg
aaactccctaacactgtagatcagcttttagactctgatgaagacaaggaggaggaagag
ttttcctgcaaacccgcagcttctgtcctccaggaaattgtgtctgtgagctga

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