Danio rerio (zebrafish): 492761
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Entry
492761 CDS
T01004
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
492761 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
492761 (tbl3)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
492761 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Utp13
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Pox_TAP
Motif
Other DBs
NCBI-GeneID:
492761
NCBI-ProteinID:
NP_001007403
ZFIN:
ZDB-GENE-041114-104
Ensembl:
ENSDARG00000052344
UniProt:
Q5U3Q5
LinkDB
All DBs
Position
3:complement(62173159..62194652)
Genome browser
AA seq
897 aa
AA seq
DB search
MAGKTLLFKSNYAVSSRIEPFYKGGRVQVSADEQHIFCTYGPKINILQISTGKIIHSIEQ
EDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTL
LATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLR
SSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVV
LLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTEDEDAEDE
ERLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHI
AVATNSSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSG
RVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTE
RAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQI
LGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN
ECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWKDVTEVELAEEQAKQEDQVLKQQ
ELQNLLHEHQYVKALGVAISLDQPHTAPRVIREIRQREDGVQELEKTLLKLRKDQKESVL
RYCTVWNTNSRSCLDAQAVLKVLLTHLSPEEMLQFQSAHTHLQALVPYTERHMQRINRLL
QASMFLDYMWQKMRITGAMDSVNMQEDEDDDGVQSVFITDKQPMQTTEEEEENEEMQCSG
DSEQRLHEDEAVCTSKTAAGKLPNTVDQLLDSDEDKEEEEFSCKPAASVLQEIVSVS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaaacgctgctcttcaagtcgaattatgcggtctccagcagaatcgagcct
ttctataagggaggtagagtgcaggtcagtgcagacgagcagcacatcttctgcacttat
ggaccaaagatcaacatcctgcagatcagcacagggaagatcatacacagcattgaacag
gaggatcaggaggacatcacagcattcgctctcagccctgatgatgagatgttagtgagc
gccagcagggctctgctcctcaggcagtgggactggaagcagcagcagtgtcgtcgctcc
tggagggccgttcacagtgtgcccgtggccagcatgagcttcgattgcacctccacactg
ctggctacaggcggctgtgacggcaccatcaaactgtgggacgtgatcaagcagtactgc
acacacaacctcaaaggctcctctggcgtcgtgcatttggtggagtttcacccagacatc
agccggctgcagctcttctcctcgtcctcagactgtgcgatccgcatctgggacctgcgc
tccagccgctgtgtgtgtgtgctggagagccactacagccccgtcactgcgctcgcgttc
tccccggacggacacacactcgtcagctctggcagagataagatctgttctgtgtgggac
ctgcaggagcagaaggtgaagaggaccatcccggtctatgaggctgtggaaggtgtggtt
ctcctgtcgggctctgctgactactcagagatgggagtgaagagtgacgcgttacacctg
gtcacggctggcagtaaaggtgtcctgcgtgtgtgggacagctcctcgtcccgctgtgtg
ttcacccagactctgcctgatgcttcgtctcacactgaagatgaagatgctgaagacgaa
gagcgcctgggcctcctgcagctcctgctgctgccccgcaccggcagactgatcacagtc
actgcagaacacaacatcctgctgtaccagacgcccacactcgctgtacagcagcagttc
gtgggctacaatgacgatgtgctggatgtgaagtttgtggggaaggacgacacacacatc
gcagtggccaccaacagctctcagctgaaggtgtttgagctgagcaccaacagctgccag
atcctgcacggacacactgataccatcttatccatcgacgtcttccgcaaaggcagcatg
tttgcgacctgtgcaaaggataagagtgtgcgtgtgtggaggatggatgtgagcagtggt
cgtgtccactgtgtggctcagggaaccggacactccaatgctgtgggctccatcgcctgc
tccaggatgaagcagcagttcgtggtgtcgggcagtcaggactgcacagtgaaggtgtgg
gatctgcccgagactactggagctgaaggagtgatgatgatgaaggctcgatccactgag
agagcgcacgagaaggatgtcaacagtgtgtgcgtctcccccaatgataagctgctggcg
tcgggctcacaggaccgcacggccaaactgtgggctctgagtgacctgcgtctgctgggg
gtctgccggggccaccgccgcggggtctggagcgtgcagttctccccggtggatcagatc
ctggggtccgcatcggccgacggcagcgtcaggatctggagcattcaggactttagctgc
cttaagacgtttgagggtcacgatgcctccgtgctgaagattatattcgtcagtcgggga
actcagctggtgtccagtggctctgacggcctggtgaagctgtggaccatcaaaactaac
gagtgtgtgcggacactggatgcgcatcaggataaggtgtgggctctgcacggcggctgc
agggacgagctgatggtcaccggctccgcagactccaccatcaccgtctggaaggacgtg
actgaagtggagctggcagaggaacaggccaaacaagaggatcaagtgctcaagcagcag
gagctccaaaatctcctccatgagcatcagtatgtgaaggctctgggtgtcgccatctct
ctggatcagccacacactgccccgcgggtcatcagagaaatccgtcagcgggaggacggg
gtgcaggagctggagaagacgctcctcaaactgcggaaggatcagaaagagtcagtgctg
cgctactgtacggtgtggaacacaaactcgcgcagctgtctggacgctcaggctgtgctg
aaggtgctgctcacacacctgagccctgaggagatgctgcagttccagagcgcgcacaca
cacctgcaggccctcgtcccatacaccgagagacatatgcagcggattaaccggctcctg
caggcctccatgtttctggattatatgtggcagaaaatgcgcatcacaggtgctatggac
agtgtgaacatgcaggaggatgaagatgatgacggtgttcagtcagtcttcatcacagac
aaacagcccatgcagaccacagaggaagaggaggaaaatgaagaaatgcagtgttcagga
gactcagagcagcgtctgcatgaggacgaagccgtctgcacgtctaaaactgctgctggg
aaactccctaacactgtagatcagcttttagactctgatgaagacaaggaggaggaagag
ttttcctgcaaacccgcagcttctgtcctccaggaaattgtgtctgtgagctga
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