Danio rerio (zebrafish): 493616
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Entry
493616 CDS
T01004
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3
KO
K13210
far upstream element-binding protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
493616 (fubp3)
03041 Spliceosome [BR:
dre03041
]
493616 (fubp3)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
493616 (fubp3)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
493616 (fubp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Secretin_N
RNA_pol_Rpb6
Motif
Other DBs
NCBI-GeneID:
493616
NCBI-ProteinID:
NP_001007777
ZFIN:
ZDB-GENE-041121-12
Ensembl:
ENSDARG00000086896
UniProt:
Q5RKQ3
LinkDB
All DBs
Position
5:872289..917451
Genome browser
AA seq
572 aa
AA seq
DB search
MMMMAELVQGQASVAQPGMKADGFTDPFHRARQIKMGGEPLPHMNNSSPVVDASLYGYAT
QKRSLDEGVANQLGAMVHGTRAIITEDFKVPDKMVGFIIGRGGEQITRIQLESNCKIQIA
ADSGGMMDRPCTLTGTPESIEQAKRLLGQIVDRCRNGPGFHSQMDGSSAVQEILIPASKV
GLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRISGDPYKVQQARELVVEIIRE
KDQGDFRSGRSDFGSRLGSSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGI
SPDRVAQVMGQPERCQHAVHLINELVQTAQERDGFGGPLGPRGRGRGRGDWNIGTPGGLQ
EVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRTFSIRGSPQQME
MARQLIDDKIGASGMGGNSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTYQTWQPQSQQD
PSHNGSQSGQMDYSKAWEQYYKKLGQQNQGQSSGPDYSKAWEEYYKKQTQAAGPGSQQSS
PPDYSAAWVEYYRQQGAYYGQGQTQAPGLPDH
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggtgcagggacaggcctcggtggctcaacccgggatgaag
gcggacggattcacggacccgtttcaccgcgcgcgacagattaagatgggtggcgagccg
ctgccgcacatgaataactcgtctccagtggtcgatgcttcgctgtacggatacgctaca
cagaaacgctcgctggatgaaggagtggcaaaccagcttggtgcaatggtacatggtaca
agggctataataacagaagacttcaaagtgcctgataagatggttggattcattattgga
cggggcggcgaacagatcaccagaattcagctggaatccaactgcaagatccagatcgct
gctgacagcggtggtatgatggatcggccctgcaccctgaccgggaccccagagagtatc
gagcaggctaagcgtctgctgggtcagatagtggaccgctgtcggaacgggccgggtttc
cacagtcagatggacggcagcagcgcggtgcaggagatcttgatcccggccagtaaagtg
ggcctggtcatcgggaaaggaggagacaccattaaacaactgcaggagcggacaggagtg
aagatgatcatgattcaggacgaccccatgcccactggatcagacaaacccttgagaatc
tccggagacccctataaagtgcagcaagcgcgagagctggtggtggagatcatccgggaa
aaggatcagggagatttcaggagcggacgcagtgatttcggttccagactcggcagcagc
attgacgtggcagtgcccaggtttgcggtcgggatcgtcatcggccgaaatggagaaatg
atcaagaagatccagaacgacgccggtgtaaggatccagttcaaaccagatgatggcatc
agtccggaccgggtggctcaagtcatgggtcagccagagcggtgtcagcacgcggttcac
ctcatcaatgagctggtgcagacggcacaggagcgtgatggttttgggggtccgctcggg
ccccggggtcgtggcaggggtcgtggagactggaacatcggcactcctggaggcctgcag
gaggtcacctacacaataccggctgataaatgcggcctggtcatcggaaaaggtggagag
accataaagaacatcaaccagcagtccggcgctcatgtggagctgcagagaaaccctccg
cccaacaccgaccccaatgtgcgcactttctccatccgcggatcccctcagcagatggag
atggccagacagctgattgacgacaagatcggggcgtctggaatgggaggaaacagcagt
tttggactcagtcctttcactcaaggacctgcgactcctcatcagaatgggccgcagacg
ttcatgaccggaggttggggcaccacctatcagacgtggcagcctcagagtcagcaggac
cccagtcacaacggctctcagagcggacagatggactactccaaagcctgggagcagtat
tataagaagctaggtcagcagaaccagggccagagcagcggccccgactacagcaaagcc
tgggaggagtattacaagaagcagactcaggcagccggaccgggctctcagcagagttct
cctccagactacagcgccgcctgggtggagtattacagacagcagggagcttattacggc
cagggacaaacacaggcccccggcctcccggatcattaa
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integrated database retrieval system
