Danio rerio (zebrafish): 494060
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Entry
494060 CDS
T01004
Symbol
pus1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
494060 (pus1)
Enzymes [BR:
dre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
494060 (pus1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
494060 (pus1)
Prokaryotic type
494060 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
494060
NCBI-ProteinID:
NP_001008603
ZFIN:
ZDB-GENE-041212-26
Ensembl:
ENSDARG00000045562
UniProt:
F1QWW1
LinkDB
All DBs
Position
21:complement(16232508..16238293)
Genome browser
AA seq
412 aa
AA seq
DB search
MLKSSCRIINSVLSQHLLQFSKLKGDQTRVFCSSFNMTEDSVKAVKRAADDDPHTETEHE
DKKLKTDQEERKYPKKKVALLMAYSGKGYYGMQRNARNSQFKTIEDELVTALVGARCIPE
GHAEEMKKMSFQRSARTDKGVSAVGQVVSLKVWMIENILEKINAHLPPQIRVLGCKRVTG
GFNSKNNCYARTYSYMLPTVAFSPKDYNQEDTSFRLTSDTLQTVNRLFGLYKGTHNFHNF
TSQKGHRDPSAMRYITHMSCGEPFIRKDVEFAVITVRGQSFMMHQIRKMIGLVIAVVKGY
VDEGVIEKSWGEEKVGVPKAPGLGLVLERVHFDGYNKRFGGDGIHETLEWTEQEEAIADF
KEKHIYPTIVDTELNEKSMVNWMTSLCIHDFEETATGNQDRKDDDEDGNASD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagctcctgtcggatcattaatagtgtattatcacaacatttactccagttt
tcaaaattaaagggtgaccagactcgtgtgttttgctcgtctttcaacatgactgaggat
tcagtcaaagctgtgaaaagagcagcagatgatgatccacacaccgaaaccgagcacgaa
gacaagaagctgaaaacagaccaggaggagaggaaataccccaagaaaaaagtggccctg
ctcatggcttattcggggaaagggtattatgggatgcagagaaatgcaagaaactcacag
ttcaaaacgattgaggatgaactggttacagctcttgttggagccagatgtatccctgaa
ggccatgcagaagagatgaagaagatgtctttccagaggagtgcacgaactgataagggt
gtttctgctgttggtcaagttgtttccctgaaggtgtggatgattgagaacatcctggag
aaaatcaatgctcatctgccaccgcaaatcagagttttaggttgcaaaagagtcaccggt
ggcttcaattccaaaaacaactgctacgcccgcacctattcctacatgctgcccactgtg
gccttctccccgaaagactataaccaggaggacacgtctttccgtctgacctcagacacc
cttcagacggtcaaccggctattcggcctgtacaaaggcacccacaactttcacaatttc
acctcgcagaagggccaccgggaccccagtgccatgcgctacatcacccacatgtcctgc
ggggagccattcatcaggaaagacgttgaatttgccgtcatcacagtccgaggccagagc
tttatgatgcaccagatccgcaagatgatcggcctcgtgatcgctgtggttaaaggatac
gtggatgaaggggtgatagagaagagctggggagaggagaaagttggtgttcccaaagct
ccggggctcgggctggtgctggagcgggtgcatttcgatggctacaacaaacgtttcgga
ggagatggcattcacgagactcttgaatggaccgagcaggaagaagccattgcggatttt
aaggaaaagcacatatatcctactatcgtggacaccgagctcaatgagaagtcaatggta
aattggatgacgtcgctgtgtattcatgatttcgaagagacggccacaggaaatcaagac
cgcaaagatgatgacgaagatggaaatgcatctgactaa
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