Danio rerio (zebrafish): 494133
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Entry
494133 CDS
T01004
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
494133 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
494133 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
494133 (srsf6b)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
SR proteins
494133 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
494133
NCBI-ProteinID:
NP_001008732
ZFIN:
ZDB-GENE-041219-1
Ensembl:
ENSDARG00000016783
UniProt:
Q5M9N3
LinkDB
All DBs
Position
11:1522135..1530865
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AA seq
355 aa
AA seq
DB search
MPRVYIGKLSYHVREKDIQRFFGGYGKLMETDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGYGGFGGRSNSGYSSRSRSGRDKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMRRALDKLDVTDINGRKI
RLVEDKPRRRRSYSASRSRSRSRRRSRSRSRRSSRSQSRSRSRSRSRSKHSRSRSGRKYR
SRSRSSRKSHSKSHSKKSRSRSRSRTEKSRSRSRSRSKAKSERDSRSRSREKSTSRKSRS
RSASPRENGDGERVKSTSRSPSPKENRHQLESPRKRSASRSRSKSRSRSRSASQD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgtacatcggcaagctgagctatcatgtgcgggagaaggacatccagagg
tttttcggcggctacgggaaactcatggagaccgatcttaaaaacgggtatgggtttgtg
gagtttgaggacacccgtgacgcagatgatgccgtgtatgagctgaacggtaaagagctg
tgcggggagcgtgtgatcgtggagcacgccagaggaccgcgccgggaccgggatggatat
ggtgggggttatgggggcttcgggggccgcagcaatagtggttatagcagcaggagccga
agcggaagagacaaatatggccctccggttcgcacagagtaccggctgatcgtggagaac
ctgtccagtcgctgcagctggcaggaccttaaggatttcatgcgtcaagctggagaggtg
acctatgctgacgcgcacaaggaacggaccaatgagggcgtgattgagtttcgctcccac
tctgatatgaggagagctttggacaagctggacgtcacagatatcaacggcagaaaaatc
cgtctggtagaggacaaacctcgccgacgccgctcgtactctgcgagcaggtcaaggtct
cgtagcagacgccgctctcgcagcaggagccgcaggagttcacgaagccaatcccgctcc
agatctcgctcaaggtctcgcagcaagcactcccgatccagatccggtcgcaaataccgc
tccaggtccagatctagtagaaagtctcactccaaatctcactccaagaagtcaaggtct
cgttctcgctcgcgtacagagaagtcccgctctcgctccaggagtcgctccaaagcaaag
tccgagagggattcaagaagccgctccagggagaaatcaaccagcaggaaatcccgaagc
agatccgcttctccaagagagaatggagacggcgagagggtgaaatccacctcccgatcg
ccgtccccaaaagaaaaccgccatcagttagaatcgccccgcaagcgttctgcgtctcgc
tcccggtccaaatctcgttcccgttctagatctgcttctcaagactga
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