Danio rerio (zebrafish): 494534 Help Entry 494534            CDS       T01004                                  Symbol cdc40 Name (RefSeq) pre-mRNA-processing factor 17   KO K12816   pre-mRNA-processing factor 17 Organism dre  Danio rerio (zebrafish) Pathway dre03040   Spliceosome Brite KEGG Orthology (KO) [BR:dre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     494534 (cdc40)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:dre03041]     494534 (cdc40) Spliceosome [BR:dre03041]  Complex C   Other components    Step II factors     494534 (cdc40) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 Beta-prop_Vps41 Beta-prop_IFT140_1st Motif Other DBs NCBI-GeneID:  494534 NCBI-ProteinID:  NP_001009990 ZFIN:  ZDB-GENE-050116-3 Ensembl:  ENSDARG00000041226 UniProt:  Q5I0F8 LinkDB All DBs Position 20:53368625..53401999 Genome browser AA seq 578 aa AA seqDB search MAAAVGSLVSYGSDSDSENESESPNNPQEIDPDALVHLKPLKSGGVTTVAVLNSAPEVAV KEDVETGVHLDPALKEVSYNPTYETMFAPEFGPMNPFRSQQMAAPRNMLSGYAEPAHVND FMFEQQRRTFSTFGYALDPSVDTSQASSNSYIGAIEEAEKNKGLTVFETGPKKSEKRKKV KGGEAADIDNFLGPWAKYQDEKDVAKPSEDEQKELDEITAKRQKRGKNEEESPAEEKTVL HIKDAYDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSG HLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDS ETGQCISRFTNRKVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV NTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSM DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt atggcggcggcggtgggttccctcgtttcgtacggcagcgactcagattctgaaaacgag tctgaatctccaaacaacccacaagaaattgacccagacgctctcgtccatctcaagcca ttaaaatcaggcggtgtgacgactgtcgccgtgttaaattcagcacctgaggtcgcagta aaggaagatgttgagaccggtgtgcatcttgatccagcacttaaagaagtctcctacaac cctacatatgaaaccatgtttgctccagaatttggaccaatgaacccgttcagatctcag cagatggcggctcccagaaacatgctgtcgggatacgctgaaccggctcatgtcaacgac ttcatgttcgagcagcagaggagaacgttttctacattcggttatgctctggacccgtcg gtggacaccagtcaggcctcgtccaacagctacattggagccatagaagaagcagagaaa aacaaaggactgactgtgtttgaaacgggaccaaaaaagtctgagaagaggaagaaggtg aaaggaggagaagctgcagacatcgataacttcctcggaccctgggctaaatatcaggac gagaaagacgtggccaaaccctcagaggatgagcagaaagagctggacgagatcacagcc aagagacagaagagaggaaagaatgaagaagagtctccagcggaggagaagactgtcctg cacattaaagacgcgtacgattaccagggccgctcgtacctacacattcctcaagacgtg ggcatcaacctgcgctcggctgacatcccggacaaatgctacctgcccaaaaaacagctg cacgtctggaccggacacaccaagggcgtcagtgccattcgtctgtttcccaagtctgga catctcctgctgtcctgctctatggactgtaagatcaagctgtgggaggtgtataatgag cggcggtgtgtgcggacgttcatcggtcacagtaaagctgtgcgtgatgtttgcttcaac aactccggcactcagttcctcagcgctgcctacgacagatacatcaaactctgggactcg gagactggtcagtgtatctcacgcttcactaacaggaaagtgccctactgtgtgaagttc aacccagacgaggacaagcaaaacctccttgttgcaggaatgtcagacaagaagatcgtc cagtgggacattcgctccggtgaagtggtccaggagtacgacaggcatctgggtgctgtg aacacgatcaccttcgtggatgagaaccgccgattcgtcagcacctccgacgacaagagt ctgcgcgtctgggagtgggatattcctgccgactttaagtacatcgccgagcccagtatg cactccatgcctgcggtcactctgtcgcccaatgggaagtggttggcctgtcagtcgatg gataatcagatcctgattttcggagctcagaatcgattccgcctgaacaagaagaagatc ttcaagggccacatggtggcgggatacgcctgtcaggtggacttcagcccggatatgagt tatgtggtttcgggagatgctgatgggaagttgaacatctgggactggaagacgactaaa ctctaccaccgcattaaagcgcacgataaagtgtgtatcagcgcgctctggcatccgcac gagacctccaaggtgatcacctgcgggtgggacggacagatcaaactgtgggactaa

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